Query= MSMg01no391_a12.b1 MSMg01no391_a12.b1 CHROMAT_FILE:
MSMg01no391_a12.b1 PHD_FILE: MSMg01no391_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:07 2005
(437 letters)
>mm_chr2_145502300_145503134
Length = 835
Score = 770 bits (398), Expect = 0.0
Identities = 427/438 (97%), Gaps = 4/438 (0%)
Strand = Plus / Minus
Query: 1 tctctcaacaagcactcacctaccctggagggaacttaatcagagaacccatgcacatga 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 635 tctctcaacaagcactcacctaccctagagggaacttaatcagagaacccatgcacatga 576
Query: 61 gggcattcctaggagctggttgtccttctccatcacatgcctcagcctcaatgacctaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gggcattcctaggagctggttgtccttctccatcacatgcctcagcctcaatgacctaga 516
Query: 121 aaaaaaaaacccacactaaaggtcctgacaacacccttcttcccaagtcctaaatataaa 180
||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 515 aaaaaaaaacccaaactaaaggtcctgtcaacgcccttcttcccaagtcctaaatataaa 456
Query: 181 ggctccttgcagcccctctaaaagccaatgtcccctaaggaggcgaaagcactaaaggat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 455 ggctccttgcagcccctctaaaagccaatgtcccctaaggaggtgaaagcactaaaggat 396
Query: 241 atgaaagtccttttgt-acatagggagcctgaggccagaaggaaaatgagcccctctgtg 299
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atgaaagtcca---gagacatagggagcctgaggccagaaggaaaatgagcccctctgtg 339
Query: 300 cccttatcaaaacatcctccccagcctgaactaggggaaaggttaataaaagctctgcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccttatcaaaacatcctccccagcctgaactaggggaaaggttaataaaagctctgcag 279
Query: 360 tcaataaacaagatgatgaagaaagcccagcttgcccaatctgctgcatgccattgtcaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcaataaacaagatgatgaagaaagcccagcttgcccaatctgctgcatgccattgtcaa 219
Query: 420 ccctcataaaccacgaag 437
||||||||||||||||||
Sbjct: 218 ccctcataaaccacgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 835
Length adjustment: 9
Effective length of query: 428
Effective length of database: 826
Effective search space: 353528
Effective search space used: 353528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_a12.g1 MSMg01no391_a12.g1 CHROMAT_FILE:
MSMg01no391_a12.g1 PHD_FILE: MSMg01no391_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:07 2005
(362 letters)
>mm_chr2_145314752_145315513
Length = 762
Score = 669 bits (346), Expect = 0.0
Identities = 358/362 (98%)
Strand = Plus / Plus
Query: 1 cagagtcagctgaataatttcaccattgagttaagtaatttaataagtgtgggttttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagtcagctgaataatttcaccattgagttaagtaatttaataagtgtgggttttctt 260
Query: 61 ctggcaaatcccaaataatgatgtcaaattgagaagaaggcattgttattagctagagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggcaaatcccaaataatgatgtcaaattgagaagaaggcattgttattagctagagtg 320
Query: 121 taaaaatgttgctgtggtggccagtatggcttttttaaggcgatttcaccacttcttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 taaaaatgttgctgtggtggccagtatggcttttttaaggcgatttcaccacttcacagc 380
Query: 181 tcagttactcccttcataaagcaagttgctgccaagtttctgatacgatgatacctggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagttactcccttcataaagcaagttgctgccaagtttctgatacgatgatacctggct 440
Query: 241 gttactacttttcagagtttctagtgactagtataatctagcctctgagtagaatttccc 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggactacttttcagagtttctagtgactagtataatctagcctctgagtagaatttccc 500
Query: 301 tcttactccacagacagtatgtgctgtgtatttgttggcatcaaaaaccaaagttctcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttactccacagacagtatgtgctgtgtatttgttggcatcaaaaaccaaagttctcag 560
Query: 361 aa 362
||
Sbjct: 561 aa 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
