Query= MSMg01no391_b12.b1 MSMg01no391_b12.b1 CHROMAT_FILE:
MSMg01no391_b12.b1 PHD_FILE: MSMg01no391_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:12 2005
(432 letters)
>mm_chr2_33175329_33176156
Length = 828
Score = 762 bits (394), Expect = 0.0
Identities = 421/432 (97%), Gaps = 4/432 (0%)
Strand = Plus / Plus
Query: 1 ccaccaggcaaaacccctctttttttctttgggaaaagtgaccactgagcacccagtaga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ccaccaggcaaaacccctctttttttctttgggaaaagtgaccactgcgcacccagtaga 260
Query: 61 cactgctcctgagctgtcctgtcctgagtcagtcagaaaacactgtgccaagatgcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactgctcctgagctgtcctgtcctgagtcagtcagaaaacactgtgccaagatgcttgc 320
Query: 121 cctcactgggtattggcccttctccactcagtcaggacagatcccctgagcagctgctac 180
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 cctcactgggtattggcccttctccactcag----gacagatcccctgagcagctgctac 376
Query: 181 tccaggtactgagattacaccagggcctcttggaatacagacctccaaaaaccagctgcc 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 377 tccaggtactgagattacaccagggcctcttggagtacagacctccaaaaaccagctgcc 436
Query: 241 tgtgaccgtcttcttctgaaaaccttagaggcaaagaaaagatggaaggcccaacccatc 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgtgaccaccttcttctgaaaaccttagaggcaaagaaaagatggaaggcccaacccatc 496
Query: 301 aagaggtgtaagagggaggagggagagacaaccagaagaaagggaacactgcaaacagaa 360
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagaggtgtgagaggaaggagggagagacaaccagaagaaagggaacactgcaaacagaa 556
Query: 361 ccacaaagtgggaaacttgaacctgcagtctgccaggtagtgacaataatggccttgcta 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 557 ccacaaagtgggaaacttgaacctgcagtcggccaggtagtgacaataatggccttgcta 616
Query: 421 ttttaaagcacc 432
||||||||||||
Sbjct: 617 ttttaaagcacc 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 828
Length adjustment: 9
Effective length of query: 423
Effective length of database: 819
Effective search space: 346437
Effective search space used: 346437
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_b12.g1 MSMg01no391_b12.g1 CHROMAT_FILE:
MSMg01no391_b12.g1 PHD_FILE: MSMg01no391_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:12 2005
(124 letters)
>mm_chr2_33327477_33328000
Length = 524
Score = 217 bits (112), Expect = 2e-61
Identities = 121/124 (97%)
Strand = Plus / Minus
Query: 1 tcatttggagtagacctggctcatctgcagagagaatataagctcagatgatcacagctc 60
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 tcatttgttgtagacctggctcatctgcaaagagaatataagctcagatgatcacagctc 265
Query: 61 aagatatacagagatagagatggaagtagaggtggatgtagatatatgttgtgtccggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagatatacagagatagagatggaagtagaggtggatgtagatatatgttgtgtccggcc 205
Query: 121 agca 124
||||
Sbjct: 204 agca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
