Query= MSMg01no392_b07.b1 MSMg01no392_b07.b1 CHROMAT_FILE:
MSMg01no392_b07.b1 PHD_FILE: MSMg01no392_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:30 2005
(472 letters)
>mm_chr2_131625869_131626742
Length = 874
Score = 781 bits (404), Expect = 0.0
Identities = 456/474 (96%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 1 atcaaaaccctttcccacatggaacaagggagagggtgctagatagctgaagtgatgcag 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaaaaccctttcccacattgaacaagggagagggtgctagatagctgaagtgatgcag 260
Query: 61 aggactcaaaagaaaactttctcagaataatagacacgaaccttcccacaaagagacagg 120
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 261 aggactcaaaagaaaagtttctcagaataatagacacaaaccttcccacaaagagaaagg 320
Query: 121 ac--agacgcttctctcttcacccaagcctaatgaggagatcttcaacgtgaccagcgag 178
|| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 acaaagatgcttctctcttcacccaagcataatgaggagatcttcaacgtgaccagcgag 380
Query: 179 aggcatcacacgtgtctctgtggttgtgaagaatggtcataattttctcgggactgagga 238
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 381 aggcatcacacgtgtctctgtggttgtgaagaatggtcgtaattttctcggggctgagga 440
Query: 239 attcagagttagagtaggctaaaggacagagggagagttggctctcgtctgagctacatt 298
||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 441 attcagagttagaataggctaaaggacagagggagcgttggctcttgtctgagctacatt 500
Query: 299 ctctcccttcccaaagtaggtcaagggtatgaaaatccaagttacttaacatgtgtgcca 358
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ctctcccttccaaaagtaggtcaagggtatgaaaatccaagttactaaacatgtgtgcca 560
Query: 359 agtatatatttcgaaacactgttgtcatatcaagttgccataaaactccagtgatattaa 418
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtatatattgcgaaacactgttgtcatatcaagttgccataaaactccagtgatattaa 620
Query: 419 ttagttatccaccagtatctgttggaagcatttattgagtattaatgaatgcat 472
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 ttagttatctaccagtatctgttggaagcatttattgagtagtaatgaatgcat 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 874
Length adjustment: 10
Effective length of query: 462
Effective length of database: 864
Effective search space: 399168
Effective search space used: 399168
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_b07.g1 MSMg01no392_b07.g1 CHROMAT_FILE:
MSMg01no392_b07.g1 PHD_FILE: MSMg01no392_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:30 2005
(374 letters)
>mm_chr2_131796074_131796847
Length = 774
Score = 574 bits (297), Expect = e-168
Identities = 361/397 (90%), Gaps = 23/397 (5%)
Strand = Plus / Minus
Query: 1 taggcatagggtttggtcagtccagatgaagatagtcctgtgtaggaagctagtag---- 56
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 taggcatagggtttggtcagtccagatgaagatagtcctgtgtaggaagctagtaggatg 594
Query: 57 -------------------gatggacacaggtctccatggcagggggcctgtactgactt 97
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gacacaggtctccatggcagatggacacaggtctccatggcagggggcctgtactgactt 534
Query: 98 agggatgtagtgcacaggagggactcccctgctggcctgtgcttaccagcaagcactcac 157
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 533 agggatggagtgcacaggagggactcccctgctggcctgtgctcaccagcaagcactcac 474
Query: 158 atcctggtgtgtcctgtttctcatctcatgctgcatctcatagacctgagctgtggctca 217
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 473 atcctggtgtgtcctgtttcttatctcatgctgcatctcatagacttgagctgtggctca 414
Query: 218 gggagggtggagctagggtgcagctgtctcttcctctgcatgcacattctaagcatgagc 277
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 413 gggagggtggaactagggtgcagctgtctcttcttctgcatgcacattctaagcatgagc 354
Query: 278 caagaagcagttcttttgtgaacttcctctacaattagatgttgaaactattctcatcac 337
|||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 353 caagaagcagctcttttgtgaacttcctctataattagttgttgaaactattctcatcac 294
Query: 338 atgtatgatgcctatgtacatcgtctatgttacaaat 374
| |||| |||| ||| |||||||||||||||||||||
Sbjct: 293 acgtattatgcatatatacatcgtctatgttacaaat 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
