Query= MSMg01no392_d09.b1 MSMg01no392_d09.b1 CHROMAT_FILE:
MSMg01no392_d09.b1 PHD_FILE: MSMg01no392_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:40 2005
(568 letters)
>mm_chr2_38195369_38196335
Length = 967
Score = 977 bits (505), Expect = 0.0
Identities = 541/565 (95%), Gaps = 20/565 (3%)
Strand = Plus / Plus
Query: 4 ggaattctctcttactatcctctttcagtctctaaacatcatttcctgatgtctctttag 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctctcactatcctctttcagtctctaaacatcatttcctgatgtctctttag 263
Query: 64 aggaatcatcccatttcatccccttttcctgaacaagaaataggtttctattcgtcttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaatcatcccatttcatccccttttcctgaacaagaaataggtttctattcgtcttcc 323
Query: 124 caaacaagcctattttctctttctctcaatttagaagaggttgttccctctttctcactc 183
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 caaacaagcctattttctctttc----aatttagaagaggttgttccctctttctcactc 379
Query: 184 aatttacaaagattttctcaatttacaaagattttctctctacccacaatttacaaccat 243
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ----------------ctcaatttacaaagattttctctctacccacaatttacaaccat 423
Query: 244 cgaagtccagtagcaccctcccattgaaggagcttttctgttgtccctttcccccactta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cgaagtccagtagcaccctcccattgaaggagcttttctgttgtccctttcccccactta 483
Query: 304 attatgtgcagttctttaactcaggacaggagacctggtgtttttactggtgtggaggca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 attatgtgcagttctttaactcaggacaggagacctggtgtttttactggtgtggaggca 543
Query: 364 acgcagagatacttctcactcaaagctgggtaccacaagtccatctctgccagagcgaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acgcagagatacttctcactcaaagctgggtaccacaagtccatctctgccagagcgaag 603
Query: 424 acagctgcccagtcccagtcaggtgcatgagtatttgtttccaaggggcaagaaggaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acagctgcccagtcccagtcaggtgcatgagtatttgtttccaaggggcaagaaggaaag 663
Query: 484 accttaccctcgaacaaagaattaaggctaagggagactattttagcatcttccgtgcta 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 664 accttaccctcgaacaaagaattaaggctaagggagactattttagcatcttccatggta 723
Query: 544 aaagactctcagcctctgaacaggg 568
||||||||||||||||||||||||
Sbjct: 724 gaagactctcagcctctgaacaggg 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 967
Length adjustment: 10
Effective length of query: 558
Effective length of database: 957
Effective search space: 534006
Effective search space used: 534006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d09.g1 MSMg01no392_d09.g1 CHROMAT_FILE:
MSMg01no392_d09.g1 PHD_FILE: MSMg01no392_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:40 2005
(248 letters)
>mm_chr2_38385991_38386638
Length = 648
Score = 449 bits (232), Expect = e-131
Identities = 244/248 (98%)
Strand = Plus / Minus
Query: 1 caagctcaaagttgggcaggggaggggcagctgaggctaaataagcaacggctccctccc 60
|||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 448 caagctcaaagttgggtaggggaggggcagctgaggctaaataggcaagggctccctccc 389
Query: 61 ccatgggcccctaaagatgcagctgagggtccacttgtcctcccagagggctcagtgttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ccatgggcccctaaagatgcagctgagggtccacttgtcctcccagagggctcagtgttc 329
Query: 121 tttctgagacagtatgtaactcattttgccatctcttaagcagtttgtttttttaaagga 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 328 tttctgagacagtatgtaactcattttaccatctcttaagcagtttgtttttttaaagga 269
Query: 181 tcatgcctaaggggctagggacatggtgtggaagagatggagagtgctctgtcttcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tcatgcctaaggggctagggacatggtgtggaagagatggagagtgctctgtcttcccag 209
Query: 241 ggggagac 248
||||||||
Sbjct: 208 ggggagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
