NTTTTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCATTCTATATGAAATTCTTTATTGTGTCATTTCTTCTTT
CTCTGTGACGGATGTAAGTAATAGCAGGTCAGCATCCTTTGTCAATGACT
TGTGTTTATGGACTTTAATCATTCCCATGGTTTTACCTTGGATTTATTCC
AAAGTCTCCTTCTATTTTTTACTTTAAAATTGACATTTGTCTTTGGACAT
CTGCTCTTCCCAAGCGTGGGACTGTCATCTCCAAGCTCTTCCCAGATGTT
TCATAAGCATCCTCTGGGCTTAATATAAACCAGACTCTCCAGAGAGACTG
TTTCCCCTTACCATGTCACAAAGATCCCCCAACAGTTGCTTAGAGGTGCC
ACATGGCATCTTTCAGAACAAAGATGTATGTTGCAGAGCCCTTGGCCCAT
ATTTGTGCTCTGACACAAGGGGGTACTACACGATAAAAAGTTCCTGGAGA
GATGAGAGATACAAGGGGCATATCGCAGCACAATAAGGAAAATTTACAGC
AATCTTATGGGCAACATCAACCTGAATGGAATGAAACTCAAGCCATTTCC
AGTAAAATGTGGAACCAACACAGAATGCCCACCTCCCTCCAACCTTATTC
AGTATAGTACTTTGAAATCTTTTCCTAGAATCACTAAAACACCGGCAGGG
ACAATCTCGGACATTTCCTAAAGGATAAGTATCCCCCCAATTAACACTCT
TGTCTCCCGCCAAAA

GAAGTGCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTGATCTTTCTATGACTTTTATCATGAAGG
GGTGTTAGACTTTGTTGAATGCCTTCTCAGCATCTAATGAGTTGATCATG
TGGTTTTTGTCTTTGAATTTGTTCATATAGTGGATTACATTGATGAATTT
CTGTATATTGAACCATCTTTGCATCCCTGGAATGAAGCCTACTTGATCAT
GATGGATGATCATTTTGATGGGTTCTTAGATTCATTTTGATAGAATTTTA
TTGAGCATTTTGTATTTATTTTCACAAGGCATATTGGTCTGAGGTTCTCT
TTCTTTGTTGTCCCTTTGTATGGTTTACGTATCTGACCAATTGTATTCTT
ATATAACTCCCTGCATTTTCTTCCTTCCGCCCTTATTTCGCCCTCTCATC
TCTATTCACTTTCCCTCTTTTTCCCCCCCATTCCCCCTCACTTTTTTCCT
ATTTCCCCCCCCCTTCTTTCCCTTTCCTTTTTACTTTCTCTTCTTCTACT
TCCTCCTCCCTACCTCTCTTTCCACCTTTTTCCTCCTCCCCCCCTCTTCC
TTTCCTCCCCCCCTTTTTCCTTTTTTTTCCCTCTCTTTTCCCCCCCCCCT
CCTCTTATTTTCCCCCTCCCTTCCTTCTTTTGTCTCTGTCCTCGCTTCTC
CCGTCTTTCCCATCCCCCTTTCTTCTTTTCCCTTGTCTTCTCCTTTTTTC
TCTCGCTCCCTCCTCCCTTTTCTCCCTCCCCTTTTCCCCATTTAC

Query= MSMg01no392_i20.b1 MSMg01no392_i20.b1 CHROMAT_FILE:
MSMg01no392_i20.b1 PHD_FILE: MSMg01no392_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:06 2005
         (498 letters)



>mm_chr2_16889488_16890385
          Length = 898

 Score =  948 bits (490), Expect = 0.0
 Identities = 493/494 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattctatatgaaattctttattgtgtcatttcttctttctctgtgacggatgta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaattcattctatatgaaattctttattgtgtcatttcttctttctctgtgacggatgta 564

                                                                       
Query: 65  agtaatagcaggtcagcatcctttgtcaatgacttgtgtttatggactttaatcattccc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtaatagcaggtcagcatcctttgtcaatgacttgtgtttatggactttaatcattccc 504

                                                                       
Query: 125 atggttttaccttggatttattccaaagtctccttctattttttactttaaaattgacat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggttttaccttggatttattccaaagtctccttctattttttactttaaaattgacat 444

                                                                       
Query: 185 ttgtctttggacatctgctcttcccaagcgtgggactgtcatctccaagctcttcccaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgtctttggacatctgctcttcccaagcgtgggactgtcatctccaagctcttcccaga 384

                                                                       
Query: 245 tgtttcataagcatcctctgggcttaatataaaccagactctccagagagactgtttccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgtttcataagcatcctctgggcttaatataaaccagactctccagagagactgtttccc 324

                                                                       
Query: 305 cttaccatgtcacaaagatcccccaacagttgcttagaggtgccacatggcatctttcag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cttaccatgtcacaaagatcccccaacagttgcttagaggtgccacatggcatctttcag 264

                                                                       
Query: 365 aacaaagatgtatgttgcagagcccttggcccatatttgtgctctgacacaagggggtac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacaaagatgtatgttgcagagcccttggcccatatttgtgctctgacacaagggggtac 204

                                                                       
Query: 425 tacacgataaaaagttcctggagagatgagagatacaaggggcatatcgcagcacaataa 484
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacaagataaaaagttcctggagagatgagagatacaaggggcatatcgcagcacaataa 144

                         
Query: 485 ggaaaatttacagc 498
           ||||||||||||||
Sbjct: 143 ggaaaatttacagc 130


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space:   433344
Effective search space used:   433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)