NNAATTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACATTATTCTTATGCAGGTACGGATCCAGAAGCTAAAGA
ACATTTGTTGTGAGCATTGTTTTTTCCCCAATGGATGCCCTTGCACATTT
GTTGAAAATGATTTGACTGTGGATTAAGGATATGTTTCTGGGCTCTCCAG
ACAAGTTCATTGTCTTCTAAACTTATCCTATCTGTCTTCACACTAAAGTC
AAGTTTTTTTTTTCTAAAATTAATGTAGGGAATTAGGGAAATTCTGTTAT
GCAAACTTTTCTTCCCCAAGATTGTTTTGGCTATTCATGGCCCTTTAAGA
AACCATTCAAATTTTAGGATTTCTTTTCTTACTTTTGTAAAACATATCTT
TGGTTCATGGCAAGTTTGACCTGATTGTATATCAGTTTAGGTAGTTATTA
GGTCTTAGAGAGGTGTTCAGTTGAATAAACCTTCATGGCCAGAGGTTTGT
TAGTGTTTACAGTAGCACCATGACAGGGTTCTGATATAGTTTCCGTCCTC
ACTCTCCCCTCTTTTAAGATAAAACAAGGTGTTTTGTTAAGGCAGGCCGA
CCGCCTTGCTACCCTACCGCCGCCTGCCTTACCCTAACATGATTTCCCCT
CTAAGCTCACGCCGCTTCCAACTCTCCCCCATCCCAGTCCCATCCGGTCC
CCCCTTACTCCCCCCCCTCCCCCTCTTCTTCTATTATTCCCAACTCCACC
CCCCTTCTTCACCCTATACCCGCTCCCCCTTCCA

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGTATATTCTTGGCTTCTAAG
TCATTTTCATCAGACTATCAATACAAGGAAAGAAAAGAATAAAGAAAGAA
AAAAAAGGAAAGAAAGGACAGCTTACAAATGTTAAGGAAAATTCCTTTGG
TTTCCTATAGAGTGAAGCCAAAAGTGTCACTTTTGTAGGCCGGGAAATGA
ATTCTCTGCTCAAAATAGAATTGTCATCAATTTCCATTCAAAATGTAGAA
TATATTTAGATCCAAAAGTCAGCAATAATGTTTCTTTGCCTACAGAGCTT
TATAAAAGAAAAAAGTTGCAACAAAGCTGTGTTTGCTTTGTGGAATTCGT
CATGAACCAGTCGTTCACTCCTGAGCATTGGAATTAAGGAGCTCATTACC
TCAGATGACTGGCTGTCCTTGTGAGAGACCCTAAGAAAACAAGGTCCATA
TCCTGTGTGCATGAAGCCCTCCTCTGAAGCTGTAGGTAAATAATGTGGGT
ACCGTGTTCTTGCTGAATAACTGAGGTGCAGGAGCATGCGAACAGACGCA
GGCACAAATGAAGACCTATCCGGGAGGAAACGCCCCTGCCCCGAGGAAAT
TCATTTCGCATTTTGAAAAAAGGTCTCCCCCCCCGGGAAACCCCATTTTA
TTGCTGGCCCTCTTCTGTACTGAACCCCTTAAAATGGGACCACCTCCCCC
CCATCCCCTTGGTGTTCTGGGCGCCG

Query= MSMg01no392_k17.g1 MSMg01no392_k17.g1 CHROMAT_FILE:
MSMg01no392_k17.g1 PHD_FILE: MSMg01no392_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:16 2005
         (450 letters)



>mm_chr2_123170290_123171139
          Length = 850

 Score =  862 bits (446), Expect = 0.0
 Identities = 449/450 (99%), Gaps = 1/450 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcgtatattcttggcttctaagtcattttcatcagactatcaatacaaggaaagaaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttcgtatattcttggcttctaagtcattttcatcagactatcaatacaaggaaagaaaag 681

                                                                       
Query: 61  aataaagaaagaaaaaaaaggaaagaaaggacagcttacaaatgttaaggaaaattcctt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aataaagaaag-aaaaaaaggaaagaaaggacagcttacaaatgttaaggaaaattcctt 622

                                                                       
Query: 121 tggtttcctatagagtgaagccaaaagtgtcacttttgtaggccgggaaatgaattctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtttcctatagagtgaagccaaaagtgtcacttttgtaggccgggaaatgaattctct 562

                                                                       
Query: 181 gctcaaaatagaattgtcatcaatttccattcaaaatgtagaatatatttagatccaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcaaaatagaattgtcatcaatttccattcaaaatgtagaatatatttagatccaaaa 502

                                                                       
Query: 241 gtcagcaataatgtttctttgcctacagagctttataaaagaaaaaagttgcaacaaagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcagcaataatgtttctttgcctacagagctttataaaagaaaaaagttgcaacaaagc 442

                                                                       
Query: 301 tgtgtttgctttgtggaattcgtcatgaaccagtcgttcactcctgagcattggaattaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtttgctttgtggaattcgtcatgaaccagtcgttcactcctgagcattggaattaa 382

                                                                       
Query: 361 ggagctcattacctcagatgactggctgtccttgtgagagaccctaagaaaacaaggtcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagctcattacctcagatgactggctgtccttgtgagagaccctaagaaaacaaggtcc 322

                                         
Query: 421 atatcctgtgtgcatgaagccctcctctga 450
           ||||||||||||||||||||||||||||||
Sbjct: 321 atatcctgtgtgcatgaagccctcctctga 292


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space:   369600
Effective search space used:   369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)