Query= MSMg01no393_a03.b1 MSMg01no393_a03.b1 CHROMAT_FILE:
MSMg01no393_a03.b1 PHD_FILE: MSMg01no393_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:45 2005
(634 letters)
>mm_chr2_112644494_112645527
Length = 1034
Score = 1156 bits (598), Expect = 0.0
Identities = 622/630 (98%), Gaps = 2/630 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctggagaactgcacttgccgagagagcctaccctagcccgttgatcatgag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctctggagaactgcacttgccgagagagcctaccctagcccgttgatcatgag 264
Query: 65 gagctcctcttctctgcccatcctgacactaagcagggaccgaatctggcccagggcagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagctcctcttctctgcccatcctgacactaagcagggaccgaatctggcccagggcagc 324
Query: 125 cagcaggttgatagtgtcattcacagaggcctggctgatggtgtaggtcttccgcagagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagcaggttgatagtgtcattcacagaggcctggctgatggtgtaggtcttccgcagagc 384
Query: 185 ctggagcaactccccaatgctgtcatactgtctccgaaggaggttgaacatcatcctcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctggagcaactccccaatgctgtcatactgtctccgaaggaggttgaacatcatcctcac 444
Query: 245 cagttccgcatcctggatttggttctcctgggcccagcggatcattgtctgtgaaactag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagttccgcatcctggatttggttctcctgggcccagcggatcattgtctgtgaaactag 504
Query: 305 ttccttcagtgttgctggaaggagaataggagagaccactaaccatcgatgcctaatgca 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 ttccttcagtgttgctggaaggagaataggagagactactaaccatcgatgcctaatgca 564
Query: 365 gagaaaggtaggaagtgcagatatctgttttaactaacaaatgtatcaacagctggttcc 424
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 565 gagaaaggtaggaagtgcagatatcttttttaactaacaaatgtatcaacagctggttac 624
Query: 425 ggttaaattctttcttattgaaggttttatggttgtaaggtttgcatggcatattcacaa 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 ggttaaattctttcttattgaaggttgtatggttgtaaggtttgcatggcatattcacaa 684
Query: 485 ttagattatattacctagacataaacatgccacctataccacagtaaaaaaatcacaatt 544
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 685 ttagattatattacctagacataaacatggcacctataccacagtaaaaaaatcacaatt 744
Query: 545 atatagtaaaaatgatgtcatttgatcatttgattaatgtttagattcatactaaaaatt 604
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atatagtaaaaattatgtcatttgatcatttgattaatgtttagattcatactaaaaat- 803
Query: 605 caa-taatgaacaagactcagtccttgcca 633
||| ||||||||||||||||||||||||||
Sbjct: 804 caaataatgaacaagactcagtccttgcca 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_a03.g1 MSMg01no393_a03.g1 CHROMAT_FILE:
MSMg01no393_a03.g1 PHD_FILE: MSMg01no393_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:45 2005
(488 letters)
>mm_chr2_112870476_112871363
Length = 888
Score = 922 bits (477), Expect = 0.0
Identities = 483/485 (99%)
Strand = Plus / Minus
Query: 1 agtgtaaatttgagtgtcaagcacacttgatagtcccagatgtctgtctgtgcaaagtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtgtaaatttgagtgtcaagcacacttgatagtcccagatgtctgtctgtgcaaagtct 626
Query: 61 gtggagataatagctgctgcatagagcaaacgcaggtgccatgccagctggtgtctacag 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 gtggagataatagctgctgcatagagcaaacgcaggtgccgtgccagctggtgtctacag 566
Query: 121 ccgggtcagcactgagcatatggttctgggcagaatggaaaagagtgaagcatgactggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccgggtcagcactgagcatatggttctgggcagaatggaaaagagtgaagcatgactggc 506
Query: 181 tgagggtcctctactcatctgcatgacacccacactgcccaccaggtgtgcgcatgcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgagggtcctctactcatctgcatgacacccacactgcccaccaggtgtgcgcatgcaaa 446
Query: 241 gagctgctagagactgaccacttaggcatgctcttgggtagggctgcctttcagcaaatg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagctgctagagaccgaccacttaggcatgctcttgggtagggctgcctttcagcaaatg 386
Query: 301 gtgatttatttagtcaaatggttatttggggtggctttattgaatccattattttcttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgatttatttagtcaaatggttatttggggtggctttattgaatccattattttcttgg 326
Query: 361 cagcccatgttgtaagaatgtgtgaacatgtgtataggacagaaatttttcagaagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagcccatgttgtaagaatgtgtgaacatgtgtataggacagaaatttttcagaagaata 266
Query: 421 ataggctttaaagcagctagagcaaggtcaaactacagtagcttatatacactggggggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataggctttaaagcagctagagcaaggtcaaactacagtagcttatatacactggggggg 206
Query: 481 ggggg 485
|||||
Sbjct: 205 ggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
