Query= MSMg01no393_c20.b1 MSMg01no393_c20.b1 CHROMAT_FILE:
MSMg01no393_c20.b1 PHD_FILE: MSMg01no393_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:00 2005
(544 letters)
>mm_chr2_168304705_168305650
Length = 946
Score = 980 bits (507), Expect = 0.0
Identities = 534/543 (98%), Gaps = 4/543 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggttaaaaacaaaaaa-aaaaaacaaactagggtgaagccagcactttcctgc 63
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggttaaaaacaaaaaacaaaaaacaaactagggtgaagccagcactttcctgc 264
Query: 64 tttgagttcagagcaaagggagatttcggcccctttgttctgtttggtggcggtcatgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttgagttcagagcaaagggagatttcggcccctttgttctgtttggtggcggtcatgac 324
Query: 124 aaacacctgtaggttttgactgggtttggtggttttagctccttaacagtcaatgcaagg 183
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaacacgtgtaggttttgactgggtttggtggttttagctccttaacagtcaatgcaagg 384
Query: 184 acccagaaggttctcccgacttctgggtggagggcggtggagaggggaaccttcagaagc 243
| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 atccagaaggttctcccgacctctgggtggaggg-ggtggagaggggaaccttcagaagc 443
Query: 244 agggttcccaacaggcagccgggactggatgccaccagcc-gtctggtgtaggcagcagg 302
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 agggttcccaacaggcagccgggactggatgccaccagccagtctggtgtaggcagcagg 503
Query: 303 ttagggaatagctggccgagagggctctcagcccacggcctccttggttggctctttgaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttagggaatagctggccgagagggctctcagcccacggcctccttggttggctctttgaa 563
Query: 363 gcagaggaaaacacagcaaagtcccagaagctggcagacacgtatgtgtgttataactta 422
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 564 gcagaggaaaacacagcaaaggcccagaagctggcagacacgtacgtgtgttataactta 623
Query: 423 aggctgagaagttgggacaggtggtcctgtcagggcaaggctgtttggctttggaaagag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggctgagaagttgggacaggtggtcctgtcagggcaaggctgtttggctttggaaagag 683
Query: 483 aaaattcaaaaaaa-tgaagccatgtctgtgggctatcgcagtttctccagttctcctgc 541
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaaattcaaaaaaaatgaagccatgtctgtgggctatcgcagtttctccagttctcctgc 743
Query: 542 cag 544
|||
Sbjct: 744 cag 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 946
Length adjustment: 10
Effective length of query: 534
Effective length of database: 936
Effective search space: 499824
Effective search space used: 499824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_c20.g1 MSMg01no393_c20.g1 CHROMAT_FILE:
MSMg01no393_c20.g1 PHD_FILE: MSMg01no393_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:00 2005
(311 letters)
>mm_chr2_168484791_168485501
Length = 711
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 1 tgaagctcgggggctgggggctgcctcagtaggtgaagtgcttgctgtgcaagacctgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgaagctcgggggctgggggctgcctcagtaggtgaagtgcttgctgtgcaagacctgcg 617
Query: 61 tttgatccccagaacccaggtgaaaaggctgggtgtggtggtgtgcgcttgcaggccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tttgatccccagaacccaggtgaaaaggctgggtgtggtggtgtgcgcttgcaggccctg 557
Query: 121 tgcaaggaaggcaggggcaggtgcatcccgggagctcatggccagatgggagtcagcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgcaaggaaggcaggggcaggtgcatcccgggagctcatggccagatgggagtcagcagt 497
Query: 181 gggaggccgtcagcatccagcaagagtggtggccatcagggtggttctaacagtgaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gggaggccgtcagcatccagcaagagtggtggccatcagggtggttctaacagtgaggtg 437
Query: 241 gccatggcgaggggaccaccagtaacagtcaccggtagcagccaggcaggtctggt-atg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 436 gccatggcgaggggaccaccagtaacagtcaccggtagcagccaggcaggtctggtga-g 378
Query: 300 gtgtgggggtgg 311
||||||||||||
Sbjct: 377 gtgtgggggtgg 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
