XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
AGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCA
ACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGG
ACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGA
AGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAA
TTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTA
TATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACTTGATAAA
CAGCATCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGG
CCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACA
ACACCCTACTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACTCT
AACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGA
AAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGG
ATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTA
CAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAAT
TAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAAATCCTATGA
TAGCAAAAAGCC

GTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCTGGAGTCCAGCTAATCTTTATTGTTTAAGTT
ATTCCTTCAGAGTGATGACTGATTATCTGAATATAAACTACTGGTTAGAC
AAAAATTATAGTTGGAAATTAATTGGAGACTGCATTGATTCCCAAGTACT
TGAATCTGTCTTCTAGTCTAGAAACTGGCACACAGCAGATACACATCAGA
ACAGTGGCCCCTCAGATTGTTTTGTGACAAAGTCATTATTTAGGGCCATG
AACATTGTATTTGGAAGCACTTAATGTAGCTCTTTAGATCACATTTTCAC
ACTGCTGACAAGTAGATTTTCAGTGCCACCCTACACTATACAAGGGTAGC
CAGGTGTCATGCTTTGAGCAAATGTTCCCAGCGTTCTAAATTACACACTA
CTGTGTGTGGCCATTTCCTATACTGTTTCTCAAGTATGGAGTGTTTTTAA
AAACTCAATTTAGTAGTAGGTTCAGCAAAGCTTCCAGCTTCCTTTGGGTG
CTTATACTTTTAATAAATTGCTTCTGAGTAGTTGAATAGGATGAGTAAAA
ACGTAAGCTTAAAAATATCCTAATAAGTAGTTTTCCATGTAATCTAATAT
TAAGAATCTATAAATTCTAAAGAAAAATATGGCAACTGTAGAAATTTTAG
GAGCCACCTCTTAATGAAAAATGACGTGCTGAATACAATGGAATGGGGGT
AAAAAATTAA

Query= MSMg01no393_e02.g1 MSMg01no393_e02.g1 CHROMAT_FILE:
MSMg01no393_e02.g1 PHD_FILE: MSMg01no393_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:07 2005
         (543 letters)



>mm_chr2_47101422_47102364
          Length = 943

 Score = 1011 bits (523), Expect = 0.0
 Identities = 538/543 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctggagtccagctaatctttattgtttaagttattccttcagagtgatgactgattatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cctggagtccagctaatctttattgtttaagttattccttcagagtgatgactgattatc 684

                                                                       
Query: 61  tgaatataaactactggttagacaaaaattatagttggaaattaattggagactgcattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tgaatataaactactggttagacaaaaattatagttggaaattaattggagactgcattg 624

                                                                       
Query: 121 attcccaagtacttgaatctgtcttctagtctagaaactggcacacagcagatacacatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 623 attcccaagtacttgaatctgtcttctagtctagaaactggcacacaacagatacacatc 564

                                                                       
Query: 181 agaacagtggcccctcagattgttttgtgacaaagtcattatttagggccatgaacattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agaacagtggcccctcagattgttttgtgacaaagtcattatttagggccatgaacattg 504

                                                                       
Query: 241 tatttggaagcacttaatgtagctctttagatcacattttcacactgctgacaagtagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatttggaagcacttaatgtagctctttagatcacattttcacactgctgacaagtagat 444

                                                                       
Query: 301 tttcagtgccaccctacactatacaagggtagccaggtgtcatgctttgagcaaatgttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 443 tttcagtgccaccctacactatacaagggtagccaggtgtcatgctttgggcaaatgttc 384

                                                                       
Query: 361 ccagcgttctaaattacacactactgtgtgtggccatttcctatactgtttctcaagtat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 383 ccagcgttctaaattacacactactgtgtgtggccatttcctatactgtttctcaaggat 324

                                                                       
Query: 421 ggagtgtttttaaaaactcaatttagtagtaggttcagcaaagcttccagcttcctttgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggagtgtttttaaaaactcaatttagtagtaggttcagcaaagcttccagcttcctttgg 264

                                                                       
Query: 481 gtgcttatacttttaataaattgcttctgagtagttgaataggatgagtaaaaacgtaag 540
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 263 ctgcttatacttttaataaattgcttttgagtagttgaataggatgagtaaaaacgtaag 204

              
Query: 541 ctt 543
           |||
Sbjct: 203 ctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)