Query= MSMg01no393_f05.b1 MSMg01no393_f05.b1 CHROMAT_FILE:
MSMg01no393_f05.b1 PHD_FILE: MSMg01no393_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:13 2005
(492 letters)
>mm_chr2_141547685_141548576
Length = 892
Score = 917 bits (474), Expect = 0.0
Identities = 474/474 (100%)
Strand = Plus / Minus
Query: 5 gaattcacctgaactaactgccttccacttcactttcaagtccagttacatgaatcgttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gaattcacctgaactaactgccttccacttcactttcaagtccagttacatgaatcgttt 594
Query: 65 ccccatcagatctagcagaagaaagaaggcactgggcagaggaggataactgttacatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccccatcagatctagcagaagaaagaaggcactgggcagaggaggataactgttacatgc 534
Query: 125 ctgggctccagtcctcccttggaatcaatcatgcaactgtctaagtaagtctgagtgtac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ctgggctccagtcctcccttggaatcaatcatgcaactgtctaagtaagtctgagtgtac 474
Query: 185 gaaatgccttgtcggttttaacaaggagaaatagcttcatccgcaaatgacattgttgcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaaatgccttgtcggttttaacaaggagaaatagcttcatccgcaaatgacattgttgcc 414
Query: 245 ttaagtgtgaagggaaatgataatgtaatgggggatgacttcggtaatattattgtgtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttaagtgtgaagggaaatgataatgtaatgggggatgacttcggtaatattattgtgtta 354
Query: 305 gctcaaagaggcagtgataaagcagaaatggaaatgtaatggcatgcaaaatttatgtta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gctcaaagaggcagtgataaagcagaaatggaaatgtaatggcatgcaaaatttatgtta 294
Query: 365 cataaaataaatttgaacataattcatgtaaaccaaatttctaccattaatcacacttta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 cataaaataaatttgaacataattcatgtaaaccaaatttctaccattaatcacacttta 234
Query: 425 ttgcaaaggaggattttgaagagaaaaagggagaaggaggaggaggaggaggag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ttgcaaaggaggattttgaagagaaaaagggagaaggaggaggaggaggaggag 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_f05.g1 MSMg01no393_f05.g1 CHROMAT_FILE:
MSMg01no393_f05.g1 PHD_FILE: MSMg01no393_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:13 2005
(443 letters)
>mm_chr2_141337822_141338664
Length = 843
Score = 729 bits (377), Expect = 0.0
Identities = 424/443 (95%), Gaps = 8/443 (1%)
Strand = Plus / Plus
Query: 1 ttgggataaaaatctttgagcctcctaaccatgttcaagtattgttatttttatttatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgggataaaaatctttgagcctcctaaccatgttcaagtattgttatttttatttatgg 260
Query: 61 tctatattttgttctttgctatatcagtgccagttataatgttaaatattaatgatgctg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tctatattttgttctttgctatatcagtgccggttataatgttaaatattaatgatgctg 320
Query: 121 tacaacactggagaaatgacatcaaagagaccactgatttgttttttgtttttgtttttt 180
||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
Sbjct: 321 tacaacactggagaaatgacatcaacgagaccactgattggttttttgtttttg-----t 375
Query: 181 ttttgttttttttgtttttgtttgtttgtttcttttaaaggaaaccaagggagagaccca 240
|||||||||||| || |||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 376 ttttgttttttt--ttgttgtttgtttgtttgtttt-aaggaaaccaagggagagaccca 432
Query: 241 taaaaacaatggcttattctgggcacttaatcacgtatcagtgaaactgaagttagatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 taaaaacaatggcttattctgggcacttaatcacgtatcagtgaaactgaagttagatgc 492
Query: 301 agcgcacctgactgtaatttatatgctgaaaaatgaaactctatgtagaacagttactaa 360
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 493 agcccacctgactgtaatttatatcctgaaaaatgaaactctatgtagaacagttactaa 552
Query: 361 taagtaagaggaacaattaacacaatgaaagaaaattcccttgaagtctcatattgattc 420
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 553 taagtaagaggaacaattaagataatgaaagaaaattcccttgaagtctcatattgattc 612
Query: 421 acgtccagctctgggaatctgag 443
|||||||||| || |||||||||
Sbjct: 613 acgtccagctttgtgaatctgag 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
