Query= MSMg01no393_i20.b1 MSMg01no393_i20.b1 CHROMAT_FILE:
MSMg01no393_i20.b1 PHD_FILE: MSMg01no393_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:32 2005
(445 letters)
>mm_chr2_118962537_118963382
Length = 846
Score = 847 bits (438), Expect = 0.0
Identities = 441/442 (99%), Gaps = 1/442 (0%)
Strand = Plus / Minus
Query: 5 gaattcttg-aaaatcaagacagtatagccatagggtttagtgtggacccagcccagaag 63
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaattcttgaaaaatcaagacagtatagccatagggtttagtgtggacccagcccagaag 587
Query: 64 gccaagagctgagaatgaagtagcagaactgtcttccagctgccagtgaggtggatggac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gccaagagctgagaatgaagtagcagaactgtcttccagctgccagtgaggtggatggac 527
Query: 124 ttcagagccacacaacagagcataggacttgtaatcttttttgctaatattcaacatgta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttcagagccacacaacagagcataggacttgtaatcttttttgctaatattcaacatgta 467
Query: 184 tttattgtcctttaatgtcacaccctacctacgaggacaaaaggagccagcacagcccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tttattgtcctttaatgtcacaccctacctacgaggacaaaaggagccagcacagcccag 407
Query: 244 gtactgccctcctaccacccatcatgtatataatacgctccctgtattcctgggtgaggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtactgccctcctaccacccatcatgtatataatacgctccctgtattcctgggtgaggg 347
Query: 304 ctggaccatggactggagacctggcagcttttgggatgacaacgctggcaaagggtctat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctggaccatggactggagacctggcagcttttgggatgacaacgctggcaaagggtctat 287
Query: 364 gaatctattttgaaagtgacttatctggagaggtgcctggagtatttttggtacaaatct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gaatctattttgaaagtgacttatctggagaggtgcctggagtatttttggtacaaatct 227
Query: 424 gaaataaactaaagttgattac 445
||||||||||||||||||||||
Sbjct: 226 gaaataaactaaagttgattac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 846
Length adjustment: 10
Effective length of query: 435
Effective length of database: 836
Effective search space: 363660
Effective search space used: 363660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i20.g1 MSMg01no393_i20.g1 CHROMAT_FILE:
MSMg01no393_i20.g1 PHD_FILE: MSMg01no393_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:32 2005
(389 letters)
>mm_chr2_118743142_118743930
Length = 789
Score = 752 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Plus
Query: 1 cccttagactcctaggcacaggagttagggccttctgtaagccctgtggtacaagtctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccttagactcctaggcacaggagttagggccttctgtaagccctgtggtacaagtctat 260
Query: 61 aagctcagctacgtagaaggctgagtcacacttcaaggccagctagggttacagaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagctcagctacgtagaaggctgagtcacacttcaaggccagctagggttacagaaagag 320
Query: 121 accccgtctctaacaaaaatagaaaaggcttggggcttagccatgataggaatgtcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accccgtctctaacaaaaatagaaaaggcttggggcttagccatgataggaatgtcagct 380
Query: 181 tagtgtgtatgcatggggttcaacccccagtcctgggggagaaagaatcaaattagggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtgtgtatgcatggggttcaacccccagtcctgggggagaaagaatcaaattagggtg 440
Query: 241 aaccaagccattcctgtgagccttcttctgtcctgggctttccctctccccttggaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccaagccattcctgtgagccttcttctgtcctgggctttccctctccccttggaaagc 500
Query: 301 tgccattcttcgtgttccaggagtccagaccgtctacatgctggctgagtttagccttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccattcttcgtgttccaggagtccagaccgtctacatgctggctgagtttagccttca 560
Query: 361 taggaaggttatgggttcaggaagttata 389
|||||||||||||||||||||||||||||
Sbjct: 561 taggaaggttatgggttcaggaagttata 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
