Query= MSMg01no393_i24.b1 MSMg01no393_i24.b1 CHROMAT_FILE:
MSMg01no393_i24.b1 PHD_FILE: MSMg01no393_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:32 2005
(327 letters)
>mm_chr2_109337958_109338688
Length = 731
Score = 572 bits (296), Expect = e-168
Identities = 317/326 (97%), Gaps = 4/326 (1%)
Strand = Plus / Plus
Query: 5 gaattccacccaccttatcaagacactcttcaagtgcttcctctcaaatgaggttactcc 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacccaccccatcaagacactcttcaagtgcttcctctcaaatgaggttactcc 264
Query: 65 gtgacccatctctgatgtcttacagggtcagtgcacacacatctcatgtagtctgtttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgacccatctctgatgtcttacagggtcagtgcacacacatctcatgtagtctgtttcc 324
Query: 125 catgctgcctcaggttttttaagagtcttggtccttggtattttcagtttttggtttttg 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgctgcctcaggttctttaagagtcttggtccttggtattttcagtttttggtttttg 384
Query: 185 tcttttttttttttttttt----aggtaaaaatgaactcggtatgtttaatgaagcttgg 240
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttttttttttttttttttttaggtaaaaatgaactcggtatgtttaatgaagcttgg 444
Query: 241 cattaccaaaaccgcatacaaacagcaagtcccacatgagaagtcccttttgttttttgt 300
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 445 cattaccaaaaccgcgtacaaacagcaagtcccacacgagaagtcccttttgttttttgt 504
Query: 301 ttgtttgtgtgtgtgtgtgtgtgtgt 326
||||||||||||||||||||||||||
Sbjct: 505 ttgtttgtgtgtgtgtgtgtgtgtgt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 731
Length adjustment: 9
Effective length of query: 318
Effective length of database: 722
Effective search space: 229596
Effective search space used: 229596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_i24.g1 MSMg01no393_i24.g1 CHROMAT_FILE:
MSMg01no393_i24.g1 PHD_FILE: MSMg01no393_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:32 2005
(125 letters)
>mm_chr2_109517777_109518301
Length = 525
Score = 242 bits (125), Expect = 7e-69
Identities = 125/125 (100%)
Strand = Plus / Minus
Query: 1 atcatttccacctgcgcagagttgggatgctttcgttcattaaaataatcttgagtcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcatttccacctgcgcagagttgggatgctttcgttcattaaaataatcttgagtcttg 266
Query: 61 agttttggaaatctttccttttccccccaataacgcccctcacccgcatcccaagcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttttggaaatctttccttttccccccaataacgcccctcacccgcatcccaagcctta 206
Query: 121 tccgg 125
|||||
Sbjct: 205 tccgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
