Query= MSMg01no394_j02.b1 MSMg01no394_j02.b1 CHROMAT_FILE:
MSMg01no394_j02.b1 PHD_FILE: MSMg01no394_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:59 2005
(348 letters)
>mm_chr2_162687672_162688417
Length = 746
Score = 611 bits (316), Expect = e-179
Identities = 338/346 (97%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 1 caggagaagaggctccaccctcgtcctaacaggccgctttgagctgctgggccttcgtca 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 201 caggagaagaggctccaccctcgtcctaacaggccgctttgagccgctgggcct--gtca 258
Query: 61 tgagcttctggaagccctgggtcctacacgcttacactgtccctattctaaaaacctcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgagcttctggaagccctgggtcctacacgcttacactgtccctattctaaaaacctcct 318
Query: 121 aaacactgtctctgacaaaagccaaggagacaagaagaccaaaaagacttttccagaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aaacactgtctctgacaaaagccaaggagacaagaagaccaaaaagacttttccagaaac 378
Query: 181 aggcagagtggctgtcttgatagcctagcctagcagggcccagtataagctgtgtgagcc 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 379 aggcagagtggctatcttgatagcctagcctagcagggcccagtataagctgtgtaagcc 438
Query: 241 aaggtcatctcagttaactgagctccggcttccccatctgtgatgggatacgatgctgtt 300
|||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaggtcgtctcagctaactgagttccggcttccccatctgtgatgggatacgatgctgtt 498
Query: 301 gccgtttgaatatgctgtctcggataggctcctgtgtttgaacact 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gccgtttgaatatgctgtctcggataggctcctgtgtttgaacact 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 746
Length adjustment: 9
Effective length of query: 339
Effective length of database: 737
Effective search space: 249843
Effective search space used: 249843
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_j02.g1 MSMg01no394_j02.g1 CHROMAT_FILE:
MSMg01no394_j02.g1 PHD_FILE: MSMg01no394_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:59 2005
(367 letters)
>mm_chr2_162876793_162877559
Length = 767
Score = 572 bits (296), Expect = e-168
Identities = 305/308 (99%)
Strand = Plus / Minus
Query: 1 tcagagactggcaagacttccacgccattcttgcctcctttctgatcacagtcttgatct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 311 tcagagactggcaagacttccacgccattcttgcctcctttctgatcacagtctagatct 252
Query: 61 ggcgctctcttcaaaatgcagtcagtaccaaaagcacaaaagatgcttaaaagctggaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ggcgctctcttcaaaatgcagtcagtaccaaaagcacaaaagatgcttaaaagctggaca 192
Query: 121 caacacagatctggaatcctatcttcttcttaggaagttgaggcaggaggataacaagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 taacacagatctggaatcctatcttcttcttaggaagttgaggcaggaggataacaagtt 132
Query: 181 caaggccaggctgggcaacttaagtgagatctttcataaaagtaaaaagagagctaataa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 131 caaggccaggctgggcaacttaagtgaaatctttcataaaagtaaaaagagagctaataa 72
Query: 241 tgtgactcagaggttcagcgcttgtgtagccatgagcacctaagtaatatctagcagtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgtgactcagaggttcagcgcttgtgtagccatgagcacctaagtaatatctagcagtag 12
Query: 301 caacatca 308
||||||||
Sbjct: 11 caacatca 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
