Query= MSMg01no395_f02.b1 MSMg01no395_f02.b1 CHROMAT_FILE:
MSMg01no395_f02.b1 PHD_FILE: MSMg01no395_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:07 2005
(509 letters)
>mm_chr2_139184458_139185361
Length = 904
Score = 911 bits (471), Expect = 0.0
Identities = 492/501 (98%), Gaps = 5/501 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagtacaaggaaaacatttgagaggtaatccaagaaagtatccagaagaaggtt 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 700 gaattcaagtacaaggaaaacatttgagaggtaatccaagaaagtatccggaagaaggtt 641
Query: 65 ggaaagataagagaggagtgactccagccaggaacagctctctctccaatccgggtgctg 124
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 640 ggaaagataagagaggagtgactccagccaggaacag--ctctctccaatccgggtgctg 583
Query: 125 agaacttggtgcttaatcctctgacagagcctggaaaacctatgtagaattcatgacaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agaacttggtgcttaatcctctgacagagcctggaaaacctatgtagaattcatgacaca 523
Query: 185 ttatttcttatccaagggcaaaagagttggacttatattcaccatctgtcaccaatcagg 244
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttattttttatccaagggcaaaagagttggacttatattcaccatctgtcaccaatcagg 463
Query: 245 gcttgaaagctgttaggagttgattgggcaaatcattcttcaagaacttccttcatgaca 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcttgaaagctgttaggagctgattgggcaaatcattcttcaagaacttccttcatgaca 403
Query: 305 caggaaggggtcattacagtaagagatatggagactggcaggcagtatctaagttttcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 caggaaggggtcattacagtaagagatatggagactggcaggcagtatctaagttttcta 343
Query: 365 tgaatagttgttatgacaaacttaatgatctaacacagaaacccacttcaggctagcgtc 424
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 342 tgaatggttgttatgacaaactt---gatctaacacagaaacccacttcaggctagcgtc 286
Query: 425 tggaagcttgaggtggagatgatgaacagctacttctggaagtcctaaggtcacatttgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tggaagcttgaggtggagatgatgaacagctacttctggaagtcctaaggtcacatttgt 226
Query: 485 tcctttggcttatggtccttt 505
|||||||||||||||||||||
Sbjct: 225 tcctttggcttatggtccttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 904
Length adjustment: 10
Effective length of query: 499
Effective length of database: 894
Effective search space: 446106
Effective search space used: 446106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_f02.g1 MSMg01no395_f02.g1 CHROMAT_FILE:
MSMg01no395_f02.g1 PHD_FILE: MSMg01no395_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:07 2005
(250 letters)
>mm_chr2_139040090_139040739
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Plus
Query: 1 tgtgactttctctgacaggtgggtagccactaacctgaagttagatatttaaactcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgactttctctgacaggtgggtagccactaacctgaagttagatatttaaactcaaat 260
Query: 61 taatatcaacatgggaacacaatggagagtggggtattgggtggggtggcgaatatctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatatcaacatgggaacacaatggagagtggggtattgggtggggtggcgaatatctct 320
Query: 121 atggtgataatgccagcctgagggaacttgagaatctgaggagaatctgcagattggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 atggtgataatgccagcctgagggaacttgagaatctgaggagaatctgcagattgggaa 380
Query: 181 atgtgccttcaaaatcaatctctgactcaactttattatgtgactttaggcttcccacat 240
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 381 atgtgccttcaaaatcaatctctgactcaattttattaagtgactttaggcttcccacat 440
Query: 241 attttg 246
||||||
Sbjct: 441 attttg 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
