Query= MSMg01no395_j01.b1 MSMg01no395_j01.b1 CHROMAT_FILE:
MSMg01no395_j01.b1 PHD_FILE: MSMg01no395_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:27 2005
(363 letters)
>mm_chr2_160544069_160544830
Length = 762
Score = 632 bits (327), Expect = 0.0
Identities = 351/359 (97%), Gaps = 1/359 (0%)
Strand = Plus / Plus
Query: 5 gaattctatacttgtgcccatttacttttagaaactgctttgcaatgaaacttaacacat 64
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatacttg-gacaatttacttttagaaactgctttgcaatgaaacttaacacat 263
Query: 65 attttcaggcttagaatattcccctattgagatttctgcaagatgagaacacaggcataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attttcaggcttagaatattcccctattgagatttctgcaagatgagaacacaggcataa 323
Query: 125 tgtatattaatctaaagctacaacctagagattctgatacccctggcctgaaaggatctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtatattaatctaaagctacaacctagagattctgatacccctggcctgaaaggatctc 383
Query: 185 cagatccacagggagtgaatctcaaatctgcacctaaggtcagcaaaggatgacggtcag 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 cagatccacagggagtgaatctcaaatctgcacctaaggtcagcaaaggacgacggtcag 443
Query: 245 caagctaagaaccccacagactgccttttgagcatgtgtctttgctttgccctgttacat 304
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||
Sbjct: 444 caagctaagaaccccacagactgccttttgagcatgagcctttgctttgccctgttagat 503
Query: 305 ggagatcctctgatactgcttactttcctcatgtgttgtcattccaagcccagaataaa 363
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggagatcctctgatgctgcttactttcctcatgtgttgtcattccaagcccagaataaa 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_j01.g1 MSMg01no395_j01.g1 CHROMAT_FILE:
MSMg01no395_j01.g1 PHD_FILE: MSMg01no395_j01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:27 2005
(246 letters)
>mm_chr2_160720547_160721192
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Minus
Query: 1 atttagggccaggcatggggggtgagcagagatggcagcagcccacactggctgagcaga 60
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 446 atttagggccaggcatgggggctgagcagagatggcagcagcctacactggctgagcaga 387
Query: 61 ggtggtggcagcccacaccatcctaaaagccccctctaactgaggcgatgccacagtcca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 ggtggtggcagcccacaccatcctcaaagccccctctaactgaggcgatgccacagtcca 327
Query: 121 ggcaactctatcagaacagacagaagcaggggccccagactctccctgtcccctgttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggcaactctatcagaacagacagaagcaggggccccagactctccctgtcccctgttaat 267
Query: 181 acccatctcccctcatagacttagtcaggtgccacttcctccagggagcttgcccagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acccatctcccctcatagacttagtcaggtgccacttcctccagggagcttgcccagact 207
Query: 241 acagtt 246
||||||
Sbjct: 206 acagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
