TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTCCAGCATTCCCAGTGGTCCCTGCACTGGCTTTAGTCCTGCTATA
TATTCACCAGGGGGAGTTCCCCAGGTTCCAATAGTGTTCACATCAGGGAT
AGAGGAAGGCCCGGGTCCAGGGAACCAGAAGCAGGCATATCATGGTACCA
CCCCTGGCCATAGCATCAGCGGCAGATTCCACTATTTTACCCCTGAGAGC
AACAGAACTAGTTGAGTAGGGACACCAACTCCATCATTATTGGCCCTTCA
CTATCTCTACAATTAGAGAAGTGATTATGCTAGGTTCTCTGAAAACCCTA
CAGAACTCATTGGTCTATTAGATACCATTCTTTTTACCCATCAACCCACT
CGAGATGATTGTCAGCAATTGTTGCAGATTCTCTTTACCACAGAGGAGAG
GGAACACATTATCCTGGAGGCCTGGAAGTATGTTTCAGGTGCAATGGCAC
TCCAACCTAGAATCCAGCTGATACTGAAGAAGGGTTCCCTCTCAGGAGAC
CAGCTTGAGATTATAAACCAGGGACAGGTAAGGAGCATCTTTCAGTCTAT
CCCAATCTCCAAAGGGAGGTCTCAGGGAAGTTGGCATAAAGCTCCAAATC
CGGTTAAAGTTTTGTATGTCGGCCAAATTAATGAAACCCGCGGAATTCCT
CCAAAAATATGGGAGGGTTCTCCCTTTTAACCCTTAAATCCCCGAGATAG
GCGAAACTTTATAACTGGGGTTGTGTTTTTTAAACAAACCCCTGTGTGTT
TGAG

CATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTGAAATCAGTCTCAGTTGAGAGAAGTCT
GGGGGTTTCAGGCTTATCAACTCTAGGAAGTCTCAGGGGTAGTCTCTTCC
CCAGCCTTTTGTAATTTTTAGAGCCTGCCTGTATTCCTTGGCTTCAGAAT
TTTAAGACATCAATCTAAACTCCATTTTGAATGACACAGAGTCTATGTCC
CTGGCATCTCATTGGGAAAGGGTCCTTGTGAGTCATATTGAGGCCACCTG
GACAATCTGAGTTAAATGCCCTATGCCAAGACCCTTCTCTCTCTCTCATA
TCTGCAAAGTTCCTTTTTAAATGTATGACAACCTGTTCCTATAACAAAGG
AGTTAAGATTTATTTAGACAGCATTGAAGTAGGTGTTACTCAGCATATGG
AATGAAAGACCCCCCCAAGGATCCAGGTAATCCATTCTGGTAATGTTTAT
TGATGAGAAAGAAAGGAAGCTGACCCTGCCCACCTCTTTCAGAAGTTTAC
CAATGTGGAAGAGCAATTTAAGGAAATGGGGCTGGCTTATTTGGCAGGCC
TTTTTGCAAGACCCCCCTTAATTTATCAAACTTTTTATAAAAATTTCTTT
TTTAACATTCTAAGGCTTTTCCAAAAATGCCCAATTTCCTTCTTCCCCCT
GGGTCCCATACCAACACTATTTTTTTTTGTTTTGAGATTTTCCTCCGTTG
GCGTTTACCACTTTTTTTACCAACTTGTCTCCCTTTCCTTGTGCGCGTGT
GA

Query= MSMg01no395_m23.b1 MSMg01no395_m23.b1 CHROMAT_FILE:
MSMg01no395_m23.b1 PHD_FILE: MSMg01no395_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:46 2005
         (453 letters)



>mm_chr2_21613826_21614681
          Length = 856

 Score =  567 bits (293), Expect = e-166
 Identities = 398/453 (87%), Gaps = 37/453 (8%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattcctccagcattcccagtggtccctgcactggctttagtcctg-ctatatattcacc 64
           |||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 520 aattcctccagcagagccagtggtccctgcactggctttagtcctgcctatatattcacc 461

                                                                       
Query: 65  agggggagttccccaggttccaatagtgttcacatcagggatagaggaaggcccgggtcc 124
           |||||||||  ||||||||||             |  ||||                 ||
Sbjct: 460 agggggagtagcccaggttcc-------------t--ggga-----------------cc 433

                                                                       
Query: 125 agggaaccagaagcaggcatatcatggtaccacccctggccatagcatcagcggcagatt 184
           |||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||
Sbjct: 432 aggggaccagaagcaggcatgtcatggcaccacccctggccacagcatcagcggcagatt 373

                                                                       
Query: 185 ccactattttacccctgagagcaacagaactag-t--tgagtagggacaccaactccatc 241
           ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||
Sbjct: 372 ccactattttacccctgagagcaacagaactagatgatgagtagggacaccaactccatc 313

                                                                       
Query: 242 attattggcccttcactatctctacaattagagaagtgattatgctaggttctctgaaaa 301
           |||||| ||||||||||||||||||||||||||||||||  || ||||||||||||| ||
Sbjct: 312 attattcgcccttcactatctctacaattagagaagtgaacattctaggttctctgacaa 253

                                                                       
Query: 302 ccctacagaactcattggtctattagataccattctttttacccatcaacccactcgaga 361
           ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 252 ccctaaaggactcattggtctattagataccattctttttacccatcaacccacttgaga 193

                                                                       
Query: 362 tgattgtcagcaattgttgcagattctctttaccacagaggagagggaacacattatcct 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgattgtcagcaattgttgcagattctctttaccacagaggagagggaacacattatcct 133

                                            
Query: 422 ggaggcctggaagtatgtttcaggtgc-aatgg 453
           ||||||||||||||||||| ||||||| |||||
Sbjct: 132 ggaggcctggaagtatgttccaggtgccaatgg 100


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 856
Length adjustment: 10
Effective length of query: 443
Effective length of database: 846
Effective search space:   374778
Effective search space used:   374778
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)