Query= MSMg01no396_k07.b1 MSMg01no396_k07.b1 CHROMAT_FILE:
MSMg01no396_k07.b1 PHD_FILE: MSMg01no396_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:49 2005
(240 letters)
>mm_chr2_153757965_153758605
Length = 641
Score = 366 bits (189), Expect = e-106
Identities = 228/241 (94%), Gaps = 1/241 (0%)
Strand = Plus / Minus
Query: 1 cagatcccctcatgtctgccccgcc-ctcgcctggcctcctgctctgcctgaggcctagc 59
|||||||||||||| ||||| | || | ||||||||||| ||||||||||||||||||||
Sbjct: 441 cagatcccctcatggctgcctcacctcacgcctggcctcttgctctgcctgaggcctagc 382
Query: 60 gttaaatgagggacgagactgtgaatgtgtccggtgcaggtcaggttgctgactcagact 119
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gttaaatgagggacgagactgtggatgagtccggtgcaggtcaggttgctgactcagact 322
Query: 120 taaggtcaaaggtcattttttaccatccacatactgaacaaccttgacactccctgatct 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 321 taaggtcaaaggtcattttttaccaaaaacatactgaacaaccttgacactccctgacct 262
Query: 180 tcatcctcttatcttaaaaattaatacagaaacccctgttgtgctcactccccagagcta 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatcctcttaccttaaaaattaatacagaaacccctgttgtgctcactccccagagcta 202
Query: 240 g 240
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 641
Length adjustment: 9
Effective length of query: 231
Effective length of database: 632
Effective search space: 145992
Effective search space used: 145992
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_k07.g1 MSMg01no396_k07.g1 CHROMAT_FILE:
MSMg01no396_k07.g1 PHD_FILE: MSMg01no396_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:49 2005
(244 letters)
>mm_chr2_153534262_153534905
Length = 644
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%)
Strand = Plus / Plus
Query: 1 ctttgtagaccaggctgaccttgaactcagaaattcgcctgcctctgcctcccaagtgct 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ctttgtagaccaggctgaccttgaactcagaaattagcctgcctctgcctcccaagtgct 260
Query: 61 gggattaaaggcatgcaccaccacgcccggctatatgcaaggtctcttaatcatgttcac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 gggattaaaggcatgcaccaccacgcccggctatatgcaaggtctcttaatcatattcac 320
Query: 121 cctctactcctccctttattccagatcattccaccctcacctgctatcaattttgttttt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 cctctactcctccctttattccagatcgttccaccctcacctgctatcaattttgttttt 380
Query: 181 ttaaaaataatttacttaatccaacttgtgctggccatatactcctgggtgtgggaccat 240
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 381 taaaaaataatttacttaatccaacttgtgctgcccatatactcctgggtgtggggccat 440
Query: 241 cca 243
|||
Sbjct: 441 cca 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
