Query= MSMg01no397_c22.b1 MSMg01no397_c22.b1 CHROMAT_FILE:
MSMg01no397_c22.b1 PHD_FILE: MSMg01no397_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:31 2005
(404 letters)
>mm_chr2_92424266_92425071
Length = 806
Score = 719 bits (372), Expect = 0.0
Identities = 394/402 (98%), Gaps = 2/402 (0%)
Strand = Plus / Minus
Query: 5 ggaattcagcaacagtatcggcaagtagtcaggcactttccaaaaaaaggctaaaggttt 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggaattcagcaacaggataggcaagtagtcaggcactttccaaaaaaaggctaaaggttt 547
Query: 65 accttccctttcattgggtctcagcatccttgcctgaatcatagagttaagtcccctaag 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 546 accttccctttcattgggtctcagcatccttgcctgaatcatagagttacgtcccctaag 487
Query: 125 cctaccccactggcttcccaggactctgcagcaaccaaaagaaatacacagggccctcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cctaccccactggcttcccaggactctgcagcaaccaaaagaaatacacagggccctcta 427
Query: 185 caagaaatggcacgaccaagaagaggaccccaaaacaacctcctttgggaaaaggcacag 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 caagtaatggcacgaccaagaagaggaccccaaaacaacctcctttgggaaaaggcacag 367
Query: 245 gcttgaccatgataagctaacgataagctaacgtggcttagaacataaatgtcacagaaa 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 366 gcttgaccatgataagctaacgataagctaacgtggcaaagaacataaatgtcacagaaa 307
Query: 305 gcaagatacactagaacaagatttttaaaaaagtgatagtgggaaacaagaaaagagaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcaagatacactagaacaagatttttaaaaaagtgatagtgggaaacaagaaaagagaga 247
Query: 365 aaagagatggtggcaagaa--agaaatccaagagcagacagg 404
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 246 aaagagatggtggcaagaaagagaaatccaagagcagacagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 806
Length adjustment: 9
Effective length of query: 395
Effective length of database: 797
Effective search space: 314815
Effective search space used: 314815
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_c22.g1 MSMg01no397_c22.g1 CHROMAT_FILE:
MSMg01no397_c22.g1 PHD_FILE: MSMg01no397_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:31 2005
(179 letters)
>mm_chr2_92240747_92241325
Length = 579
Score = 337 bits (174), Expect = 3e-97
Identities = 177/178 (99%)
Strand = Plus / Plus
Query: 1 catccaaaccccagacccactcccgccaaggtggaggggaaaggcgacctcccaggttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccaaaccccagacccactcccgccaaggtggaggggaaaggcgacctcccaggttcc 260
Query: 61 tgccccagatccacctcaatcaccccaccccatgacacggaatggcagaaggagctgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccccagatccacctcaatcaccccaccccatgacacggaatggcagaaggagctgcgg 320
Query: 121 ggggccacgcggtggccaccaacctggactggaggttgtgggggctggtggctcggcc 178
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 ggggccacgcggtggccaccaacctggactggaggttgtgggggctgggggctcggcc 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
