Query= MSMg01no398_d15.b1 MSMg01no398_d15.b1 CHROMAT_FILE:
MSMg01no398_d15.b1 PHD_FILE: MSMg01no398_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:54 2005
(369 letters)
>mm_chr2_130437068_130437836
Length = 769
Score = 714 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 1 aagaagttgtcatagctgagttacacaatctgactctgagtttcacaagaacgtaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaagttgtcatagctgagttacacaatctgactctgagtttcacaagaacgtaatgga 260
Query: 61 aagtgactctggaagatacacatatttaaaagagtaggttcaaaccggttaccagggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtgactctggaagatacacatatttaaaagagtaggttcaaaccggttaccagggagg 320
Query: 121 tgaggactacctgtcaaatactggaaaagcacttaaccttaaagaatagaaggaacacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggactacctgtcaaatactggaaaagcacttaaccttaaagaatagaaggaacacca 380
Query: 181 atgcagtgagcaattttagaaatcggatactttagcctttaaaaaccacctagtacttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcagtgagcaattttagaaatcggatactttagcctttaaaaaccacctagtacttat 440
Query: 241 aatctctaaattgagttacctgtccatccagaaaaaaatgtggcttgcaacatttttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatctctaaattgagttacctgtccatccagaaaaaaatgtggcttgcaacatttttcag 500
Query: 301 acctagttaaaataaaatatagctctcctagctatttctatatatatatggccactggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctagttaaaataaaatatagctctcctagctatttctatatatatatggccactggga 560
Query: 361 caagaggat 369
|||||||||
Sbjct: 561 caagaggat 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_d15.g1 MSMg01no398_d15.g1 CHROMAT_FILE:
MSMg01no398_d15.g1 PHD_FILE: MSMg01no398_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:54 2005
(234 letters)
>mm_chr2_130628174_130628808
Length = 635
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 gttcgttattacagtgagccatactgcacaggcgttgagttggtcaagggcttaattcat 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gttcgtcattacagtgagccatactgcacaggcgttgagttggtcaagggcttaattcat 375
Query: 61 aaattttattatttcattggttgagatgcttcgccaggtcatgtacttattgcctcattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaattttattatttcattggttgagatgcttcgccaggtcatgtacttattgcctcattg 315
Query: 121 tggttttttaaagttttatgaactcttaattttgaaaaccagcctgattgataaagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tggttttttaaagttttatgaactcttaattttgaaaaccagcctgattgataaagaaat 255
Query: 181 acctacacttcctgaacagagctttgcaatcaaaaaaggaag-cccaggtagca 233
||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 254 acctacacttcctaaacagagctttgcaatcaaaaaaggaagccccaggtagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 635
Length adjustment: 9
Effective length of query: 225
Effective length of database: 626
Effective search space: 140850
Effective search space used: 140850
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
