NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCC
GCGGAATTCAGGACAGTCACCCTCCTTCCTTCTCCCCTCCTTTTTAGGTC
CTCCCCATTCTCCTTTTCTCTCCCTTCTTCCCTTCTTTCTTGATCCCCAT
CAGACGTTTTAGGTTGCTTGAGCAAGGGCTTTGACATGTTTGTTTTGTGA
CTCACTTGTGATAATCTGCTTAGCCATTCCCATGCCCATGTCAAATGAAT
CTCCGGCAGCTATGCCAAAGCAAAGCAAGGAACTGAGCTGAAGCCACAGC
TCATGGACCAGGGTATTTATCATGTTTGATGTTCATGTTGGCTCCGTCTT
CTTAAACGTTTCCTTCTTGAGGGATCTTTACCTGCTCCTAGGCCTGGTCA
CATCTCCTAGTCTTCTGAAAAATGTGAAGGCCGAATGGCATAGTGTACAA
TAACAGCTTAAAAGTAGGAGTCCTGAACTGAGATGGAAGGTTGTCAATTT
AACTTGGTTTTCCATTTCAGACCAGCGTACTGGGAAATATCATTAATGCG
GAAGCCCAGCTTCCTTCCTCTCTCCCCCTCAAAAAAGCCATCGCAAGGAG
TCAGGTTTCTGTATCCTTCCTGATTACATCTATGACTCTAACAGCATGGA
CCATATCCCGAGAGCCTCCCTTCCTTGTCATTTTGTACTTCCTTCTCTTT
TGGGGCCAGATTTGAACCTGAGAAATCCCCTTAAAGCTACGCTT

NNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA
TCAGTCTGGCGGTTCCTCATTATTTTTGGACATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTCCTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGGAACTCCACCATATGTACTCACTGATAAG
TGGATATTAGCCCCAAAACCTAGAATTTCCCAAATATAAGGGGCCATTTG
GTTTAACCCCTGAAATTCCCGAAAAATAGAAAACTGTAGTGCGGGACCCT
ATGGCTCTTCN

Query= MSMg01no398_l21.b1 MSMg01no398_l21.b1 CHROMAT_FILE:
MSMg01no398_l21.b1 PHD_FILE: MSMg01no398_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:34 2005
         (531 letters)



>mm_chr2_13292618_13293552
          Length = 935

 Score =  934 bits (483), Expect = 0.0
 Identities = 513/525 (97%), Gaps = 4/525 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  ttcaggacagtcaccctccttccttctcccctcctttttaggtcctccccattctccttt 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 ttcaggacagtcaccctccttccttctcccctcctttttaggtcctccccattctccttt 761

                                                                       
Query: 71  tctctcccttcttcccttctttcttgatccccatcagacgttttaggttgcttgagcaag 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 tctctcccttcttcccttctttcttgatccccatcagacgttttaggttgcttgagcaag 701

                                                                       
Query: 131 ggctttgacatgtttgttttgtgactcacttgtgataatctgcttagccattcccatgcc 190
           |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 700 ggctttgaaatgtttgttttgtgattcacttgtgataatctgcttagccattcccatgcc 641

                                                                       
Query: 191 catgtcaaatgaatctccggcagctatgccaaagcaaagcaaggaactgagctgaagcca 250
            ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tatgtcaaatgaatctccggtagctatgccaaagcaaagcaaggaactgagctgaagcca 581

                                                                       
Query: 251 cagctcatggaccagggtatttatcatgtttgatgttcatgttggctccgtcttcttaaa 310
           |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 580 cagctcatgggccagggtatttatcatgtttgatgttcatgttggctccgtctttttaaa 521

                                                                       
Query: 311 cgtttccttcttgagggatcttta----cctgctcctaggcctggtcacatctcctagtc 366
           ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 520 cgtttccttcttgagggatctttacggccctgctcctaggcctggtcacatctcctagtc 461

                                                                       
Query: 367 ttctgaaaaatgtgaaggccgaatggcatagtgtacaataacagcttaaaagtaggagtc 426
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ttttgaaaaatgtgaaggccgaatggcatagtgtacaataacagcttaaaagtaggagtc 401

                                                                       
Query: 427 ctgaactgagatggaaggttgtcaatttaacttggttttccatttcagaccagcgtactg 486
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctgaactgagatggaagtttgtcaatttaacttggttttccatttcagaccagcgtactg 341

                                                        
Query: 487 ggaaatatcattaatgcggaagcccagcttccttcctctctcccc 531
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggaaatatcattaatgcggaagcccagcttccttcctctctcccc 296


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 935
Length adjustment: 10
Effective length of query: 521
Effective length of database: 925
Effective search space:   481925
Effective search space used:   481925
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)