Query= MSMg01no398_m17.b1 MSMg01no398_m17.b1 CHROMAT_FILE:
MSMg01no398_m17.b1 PHD_FILE: MSMg01no398_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:38 2005
(430 letters)
>mm_chr2_180412642_180413471
Length = 830
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%), Gaps = 2/427 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctattcgcaa-agtagctcaataggacgtttgtccagtatgcccaagccaca 63
||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaattcttcaatt-ggaacagtagctcaataggacgtttgtccagtatgcccaagccaca 572
Query: 64 ggtttttgaaaacccagtattggggtagggaatggaataaggatttgcaaattcattcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggtttttgaaaacccagtattggggtagggaatggaataaggatttgcaaattcattcat 512
Query: 124 tgttctattcaatcatgaaggtcaatccctgttgctggcattgctgccctaagccaacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgttctattcaatcatgaaggtcaatccctgttgctggcattgctgccctaagccaacac 452
Query: 184 cactattgttcctacctgtaggggctagagaaacatgccagtcccttgagcagttgcaat 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cactattattcctacctgtaggggctagagaaacatgccagtcccttgagcagttgcaat 392
Query: 244 gggtaactgttgccctgtttaacaccacccaaaatagaagggggcttggtgtttcaagat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gggtaactgttgccctgtttaacaccacccaaaatagaagggggcttggtgtttcaagat 332
Query: 304 gctagtaggcaaatggttagggaaagccatcatttatgggacatatcagtttaattacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gctagtaggcaaatggttagggaaagccatcatttatgggacatatcagtttaattacat 272
Query: 364 aacatgacttttatgcactgttgggagtgtgcctaatgtgtcctaacgtccttaagagga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aacatgacttttatgcactgttgggagtgtgcctaatgtgtcctaacgtccttaagagga 212
Query: 424 aagaagc 430
|||||||
Sbjct: 211 aagaagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_m17.g1 MSMg01no398_m17.g1 CHROMAT_FILE:
MSMg01no398_m17.g1 PHD_FILE: MSMg01no398_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:38 2005
(269 letters)
>mm_chr2_180234247_180234915
Length = 669
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%)
Strand = Plus / Plus
Query: 1 tgcttcctggggtactcatcctagcccaggtggtccccgggagcgtgcaggagcaaccat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tgcttcctggggtactcatcctagcccaggtggtccccgggagcgtgcaggagcaaccgt 260
Query: 61 cagccagtatccgcgtggggaggggacagtggctgtggcgtctctgactctccaacaccc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccagtatccgggtggggaggggacagtggctgtggcgtctctgactctccaacaccc 320
Query: 121 accctcctccactgctgggcgcgccgcgcagccgccagctcagtggaagcgcgaggagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accctcctccactgctgggcgcgccgcgcagccgccagctcagtggaagcgcgaggagcc 380
Query: 181 cggcaggctccggcgcagcaggaggtgtgcgaagtcgggtgcgggaagagctccaagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 cggcaggctccggcgcagcaggaggtgtgcgaagtcgggtgcgggaagagctccaagcag 440
Query: 241 tagagggagaacgagggtgagcacgctgg 269
||||||||||||||||||||||||||||
Sbjct: 441 aagagggagaacgagggtgagcacgctgg 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
