Query= MSMg01no399_p15.b1 MSMg01no399_p15.b1 CHROMAT_FILE:
MSMg01no399_p15.b1 PHD_FILE: MSMg01no399_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:07 2005
(595 letters)
>mm_chr2_78667048_78668042
Length = 995
Score = 1094 bits (566), Expect = 0.0
Identities = 578/582 (99%)
Strand = Plus / Minus
Query: 8 gaattcccaattatctctatactcgagttaaaaaaattaattgtcatttggttctgcctc 67
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gaattcccaattagctatatactcgagttaaaaaaattaattgtcatttggttctgcctc 884
Query: 68 ttctaatgaggaataaattttgtctcacatgctgatgagtgcctcacaactctgcctgat 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 ttctaatgaggaataaattttgtctcacatgctgatgagtgcctcacaactctgcctgat 824
Query: 128 tgctttccaatacagtctctacctcacaaagaatcccatcctactttcattcattgtgag 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tgctttccaatacagtctctacctcacaaagaatcccatcctactttcattcattgtgag 764
Query: 188 ctgttaatagactgtgtttcttatattggggggaaaagcatgccttttcacaatttacac 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 ctgttaatagactgtgtttcttatattggggggaaaagcatgccttttcacaatttacac 704
Query: 248 tattgaatgtaaaacatttcatttactgtttctctaagtgacttcttaacctattgaaaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tattgaatgtaaaacatttcatttactgtttctctaagtgacttcttaacctattgaaaa 644
Query: 308 cagtttcttaataccttgcagaggccatccaccatcgtctgagcatgtatatgatgtgtt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 cagtttcttaataccttgcagaggccatccaccatcgtctgagcatgtatatgatgtgtt 584
Query: 368 tgcatatgcgcatgtgtgtgtgtgatattcacctgtgtgtcctctggtgtgtagttttat 427
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tgcatatgtgtatgtgtgtgtgtgatattcacctgtgtgtcctctggtgtgtagttttat 524
Query: 428 gctctactcacctttagctctgggaggtgattgtgttaccagctctcacccaacttccct 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gctctactcacctttagctctgggaggtgattgtgttaccagctctcacccaacttccct 464
Query: 488 attgctctatctgcctttgctctgggaattggccactgctatcagtcctctcccagcttc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 attgctctatctgcctttgctctgggaattggccactgctatcagtcctctcccagcttc 404
Query: 548 ccttgaatcttcggctgaaacacacacacacacacacacaca 589
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccttgaatcttcggctgaaacacacacacacacacacacaca 362
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_p15.g1 MSMg01no399_p15.g1 CHROMAT_FILE:
MSMg01no399_p15.g1 PHD_FILE: MSMg01no399_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:07 2005
(601 letters)
>mm_chr2_78522752_78523752
Length = 1001
Score = 1087 bits (562), Expect = 0.0
Identities = 592/602 (98%), Gaps = 3/602 (0%)
Strand = Plus / Plus
Query: 1 agactttataagaaaaagataaaactctcagccactatatctcacactttccacactcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 agactttataagaaaaagataaaactctcagccactatatctcacactttccacactcca 261
Query: 61 cagataaatgccaaggcttgcatgtaaaatggaatcctaacttttagaggggaaaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cagataaatgccaaggcttgcatgtaaaatggaatcctaacttttagaggggaaaaaaag 321
Query: 121 aaaacagatatgaatccttaggatctaggaccagacaaaaggtttttttataacttaaca 180
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 aaaacagacatgaatccttaggatctaggaccagacaaaagg-ttttttataacttaaca 380
Query: 181 ataacagttagatctgtataaggagagaacgctaaaatggactgctttatcctttgcttt 240
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 ataacagttggatctgtataaggagagaatgctaaaatggactgctttatcctttgcttt 440
Query: 241 tcagataaccttgttaaaatgatagaaagaagaaaacaacaatgaaagttttaaagatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagataaccttgttaaaatgatagaaagaagaaaacaacaatgaaagttttaaagatga 500
Query: 301 tggaaagatacatatgcatgggaggaattatttgcaaagcacatattcagaaaaaaaatt 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 501 tggaaagatacatatgcatgggagtaattatttgcaaagcacatattcagaaaaaggatt 560
Query: 361 agtttctataccattaaaaaaaactgcaaaatacaaatcaaattagaccttgggcaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtttctataccattaaaaaaaactgcaaaatacaaatcaaattagaccttgggcaaaaa 620
Query: 421 aaaaatgtaaataacattttaccaatgacaaaatagtagtggcaaacctaaaacagacct 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaa-tgtaaataacattttaccaatgacaaaatagtagtggcaaacctaaaacagacct 679
Query: 481 t-caaccctatcactactcactgaggaagtacaaatgaaacctgcaatcagggccagagt 539
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttcaaccctatctctactcactgaggaagtacaaatgaaacctgcaatcagggccagagt 739
Query: 540 ggtggattagccaataaaagcatttgccatgaaggccagaggacccacgtttcatccctg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggtggattagccaataaaagcatttgccatgaaggccagaggacccacgtttcatccctg 799
Query: 600 ga 601
||
Sbjct: 800 ga 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
