Query= MSMg01no400_i08.b1 MSMg01no400_i08.b1 CHROMAT_FILE:
MSMg01no400_i08.b1 PHD_FILE: MSMg01no400_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:51 2005
(261 letters)
>mm_chr2_7111845_7112505
Length = 661
Score = 489 bits (253), Expect = e-143
Identities = 259/261 (99%)
Strand = Plus / Plus
Query: 1 tgaggagaaactgagttctatactcagcacccacattgggcatcttactgccacctgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggagaaactgagttctatactcagcacccacattgggcatcttactgccacctgaaa 260
Query: 61 ctctagcttgaggagaatttgaccctctggcctctgagggcattcatatttccaaacccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ctctagcttgaggagaatttgaccctctggcctctgagggcattcatattcccaaacccc 320
Query: 121 caaacatgcacatgataaagtaagtgaatcatttgaaaagaaagaattaagtgaaggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacatgcacatgataaagtaagtgaatcatttgaaaagaaagaattaagtgaaggaaa 380
Query: 181 tgccaaaattagataatagtttcttcaaaatcataaggaaaatgaaataaacaacatgtt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccaaaattagataacagtttcttcaaaatcataaggaaaatgaaataaacaacatgtt 440
Query: 241 gtgtctgtatattaaacaatg 261
|||||||||||||||||||||
Sbjct: 441 gtgtctgtatattaaacaatg 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_i08.g1 MSMg01no400_i08.g1 CHROMAT_FILE:
MSMg01no400_i08.g1 PHD_FILE: MSMg01no400_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:51 2005
(247 letters)
>mm_chr2_7304917_7305563
Length = 647
Score = 408 bits (211), Expect = e-118
Identities = 238/247 (96%)
Strand = Plus / Minus
Query: 1 gtattttgaggatacacagataaacttttatctttaagaagatttatttttgttattttt 60
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 447 gtattttgaggatacacagataaacttttatctttaaaaagatttatttttgttatttta 388
Query: 61 aattgtgtgcatgtctatgtggggtggaagccatcagattcccctagagctaaatttctg 120
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 aattgtgtgcatgtctgtgtggggtggaagccatcagattcccctagagctgaatttctg 328
Query: 121 ctgtgtatttcccatgagcaacaggttaaacatgcctaaggattttcatcctcatttttc 180
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgtgtatgtcccacgagcaacaggttaaacatgcctaaggattttcatcctcatttttc 268
Query: 181 cttatacaataaatattttttctccttttttaaaaccagtatttatttttattctaggtc 240
| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 267 cagatacaataaatattttttctccttttttaaaaccggtatttatttttattctaggtc 208
Query: 241 tctgggc 247
|||||||
Sbjct: 207 tctgggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
