TAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTACGTTTCCAAAGGTCCCAAAGCTTTCTTAGAATCTTTGTCTTA
ATTACTGAAATCTCCACCTCAGTACCAAGCTATCATTAAACAACACACAT
CCTTTGTCATGAGAATAAATATCTTAATATTTTACAGTGGATTCTTGATT
TAGTAACCAAAACATGCAAATGAACATATGCATTCATAATAAGATCTCAA
TCAAACTGGCTTAGGCTATATGTACAGGAATAGATGAGGCTAATAATTAT
GAAAGTATATTAATTGTCCAAAGACAGATGATCTTCCCATTCTAAATCTG
TGAACCCTTATGCAATACCATATCCACTTTAATAATTGCTTTCCCTTTGC
ATTTCTTATTATTACTTCTTCAAGATCAGTGAGATTGAACAGATGAGCTA
CTCTCAAGGAAACAGTGTGCTCCTGGCAACTTGTAGTTTGGCAAGAAGGA
ATCACCAGATTCAGCACTGACTCTCCCAAGTAACTCCTCCCTGGCACCTT
CCCGTTCTCAGCTCCTCAGGCATTATCTCGTTAGCTAGTAGAGAATATGC
AGCTGTATTGGAAATCTTGAGATAAAAAACTTGTTCGTAAGATGAAAAGG
AAAAGTGAGATGTTCTAAACCCTGTAAAAATCACTATCCACGGACTTTTA
TCTACTAAAAAAATTACGACTATTCCTAATTTCTAAGGAGAAGATATCTC
ATATGAGTAAAAAACACTTTCCCCGGATATTTTT

ATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGATCCCAGATGTAGGAGCTGTGATG
TAGTTGAAATTTGAGGCTGGAATTTCCTATGATCTATTGATCTCTGCATT
TTGTGTACTCTTGGTTTTCATTTGCTCTAAAGAGAAGCTTCCTTGATGAG
GGTAGGAAACACCAATTATCTATGGGCCAAGGAATGAGTTTTAGAATGTA
ATAAGAAATTATGCTGTTCTAGTAAACTATCAGTAAGAGATTTTTTTTTT
TTTTTTTTTTTTTTAGGTTCTTGACACCACTAGACCAGGAAACCTGACTA
AACATCTAGTAGCAGGCATGATTTTCCTCCTGTTGAGTGAGCCTTAAATT
AAACTAGAGAGTGCTACTTCTTGTAACGTTGTATGTATTTTGCTACTCTA
GACATTATTATAGTTCATAGTCTTTCTGACTTTGGTAAAACAAAATCTCA
ATATGATTTTACCTGTATTTTATTAATTTCTAAAGATGATGAACATTTTT
GAGGTATTTCTTAGNTGATTATCTTTTTAATTTTTACTGATAACCCTCTG
TTTAAATCCCAAGCCTATCCCTTTAACAAAATTTAATGTGCTCTTAAGAT
AAAAAAGACCTATATAGACTTAAAGTAGAGGGACTACCCTTCCTTGTAAT
AAGCCTATAGATGAGAAATTTATTGGGCATATTCTTCTTCGTGGAAAAAA
TTTTGAACCTCTCCCTTAAGGAAGG

Query= MSMg01no400_l09.b1 MSMg01no400_l09.b1 CHROMAT_FILE:
MSMg01no400_l09.b1 PHD_FILE: MSMg01no400_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:06 2005
         (514 letters)



>mm_chr2_97317416_97318328
          Length = 913

 Score =  917 bits (474), Expect = 0.0
 Identities = 504/514 (98%), Gaps = 1/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtcccaaagctttcttagaatctttgtcttaattactgaaatctccacctcagtacca 60
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 713 aggtcccaaagctttcttagaatctttgtcttaattactgaaatctacacctcagtacca 654

                                                                       
Query: 61  agctatcattaaacaacacacatcctttgtcatgagaataaatatcttaatattttacag 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 653 agctatcattaaacaacacacatcctttgtcatgagaataaatgtcttaatattttacag 594

                                                                       
Query: 121 tggattcttgatttagtaaccaaaacatgcaaatgaacatatgcattcataataagatct 180
           ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 593 tgggttcttgatttagtaaccaaaacatgcaaataaacatatgcattcataataagatct 534

                                                                       
Query: 181 caatcaaactggcttaggctatatgtacaggaatagatgaggctaataattatgaaagta 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caatcaaaatggcttaggctatatgtacaggaatagatgaggctaataattatgaaagta 474

                                                                       
Query: 241 tattaattgtccaaagacagatgatcttcccattctaaatctgtgaacccttatgcaata 300
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tattagttgtccaaagacagatgatcttcccattctaaatctgtgaacccttatgcaata 414

                                                                       
Query: 301 ccatatccactttaataattgctttccctttgcatttcttattattacttcttcaagatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ccatatccactttaataattgctttccctttgcatttcttattattacttcttcaagatc 354

                                                                       
Query: 361 agtgagattgaacagatgagctactctcaaggaaacagtgtgctcctggcaacttgtagt 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 353 ggtgagattgaacagatgagctactctcaaggaaacagtgtgctcctggcaactt-tagt 295

                                                                       
Query: 421 ttggcaagaaggaatcaccagattcagcactgactctcccaagtaactcctccctggcac 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 294 ttggcaagaaggaatcaccagattcagcactgactctcccaagtaagtcctccctggcac 235

                                             
Query: 481 cttcccgttctcagctcctcaggcattatctcgt 514
           |||||| |||||||||||||||||||||||||||
Sbjct: 234 cttcccattctcagctcctcaggcattatctcgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space:   455112
Effective search space used:   455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)