Query= MSMg01no401_g23.b1 MSMg01no401_g23.b1 CHROMAT_FILE:
MSMg01no401_g23.b1 PHD_FILE: MSMg01no401_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:03 2005
(257 letters)
>mm_chr2_70359082_70359738
Length = 657
Score = 462 bits (239), Expect = e-135
Identities = 251/255 (98%)
Strand = Plus / Plus
Query: 1 tctgtgtagtgagttctaggtcaaacagagctacaaagtgataccctgtctcagaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtgtagtgagttctaggtcaaacagagctacaaagtgataccctgtctcagaaacaa 260
Query: 61 acaagaagtctgccatgggatgtggagccaagtggagggacaagtgaattgctgatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaagaagtctgccatgggatgtggagccaagtggagggacaagtgaattgctgatgtat 320
Query: 121 ggtagaaataagtgtgaccttttccataagtaaaaataatacaactaaatgacttatcca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtagaaatacgtgtgaccttttccataagtaaaaataatacaactaaatgacttatcca 380
Query: 181 gatatacgaaggactccattataaggataatcaatcctgtagctgaatagcctagaaagc 240
|||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 381 gatatacgaaggactccattatgaggaaaatcaatcctgtaactgaatagcctagaaagc 440
Query: 241 aacaaaaatctagga 255
|||||||||||||||
Sbjct: 441 aacaaaaatctagga 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_g23.g1 MSMg01no401_g23.g1 CHROMAT_FILE:
MSMg01no401_g23.g1 PHD_FILE: MSMg01no401_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:03 2005
(430 letters)
>mm_chr2_70552399_70553228
Length = 830
Score = 793 bits (410), Expect = 0.0
Identities = 425/434 (97%), Gaps = 8/434 (1%)
Strand = Plus / Minus
Query: 1 actgtgtagactggttttaaaagaaaaccaaaaataaaaataaaatttaaagatgcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgtgtagactggttttaaaagaaaaccaaaaataaaaataaaatttaaagatgcagag 444
Query: 61 ttgacctaggaaacagaaaccctaatgggacttttgtgtcaatgtgctcttcattaaaga 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 ttgacctaggaaacagaaaccctaatgggacttctgtgtcaatgtgctcttcattaaaga 384
Query: 121 cagtcacactgactagaggaagagattgaggctaagaatggcttcctacagtttgacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cagtcacactgactagaggaagagattgaggctaagaatggcttcctacagtttgacaaa 324
Query: 181 acaaaactgaaaacaaaatgtgattagagtcagaaaaaaatacaaacaaaagctatctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acaaaactgaaaacaaaatgtgattagagtcagaaaaaaatacaaacaaaagctatctta 264
Query: 241 agaatgttgttg----tttttgggaagatggctcagtggttaagcaccctggctgttgtt 296
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agaatgttgttggggc----tgggaagatggctcagtggttaagcaccctggctgttgtt 208
Query: 297 cagagagcctgggtccagttcccagcacccacatgacagctgacaactgacaccctcaca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 cagagagcctgggtccagttcccagcacccacatgacagctgacaactgacaccctcaca 148
Query: 357 cagagacttgcagggaaaataccaatgcacatgaagtaaacataaagtgaaaataaagaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cagagacttgcagggaaaataccaatgcacatgaagtaaacataaagtgaaaataaagaa 88
Query: 417 ttttgtaagtagaa 430
||||||||||||||
Sbjct: 87 ttttgtaagtagaa 74
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
