TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAA
TTCTTTGTTTATTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTC
TGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCCTA
TCTGATTTAGGATAGGTAAAGATCGTTTCCTAATCTTTTGGTGGCCTTTT
AGTCTTATTGACTGTGGCTTTTGCCTTGCAGAAGCTTTGCAGTTTCATGA
GGTCTCCATTTGTCAATTCTCGATCTTACAGTATAAGCCATTGCTGTTCT
ATTCAGGAACTTTTTTTCTTGGGTCATATCCTCGAGGCTTTTCCCCACTT
TCTCCTCTATAATATAGTTTCAGAGTCTCTGGTTTTATGTGGAGTTCCTT
GATCCATTGTGTTGCAAAGCTGCTAGTATGTGCTCTCTCTAGTTTCTTTT
TGGAGGCACTCAGAGCTATTAGTTTCCCTCTTAGAAATGCTTTCATTGTG
TACCATAGGTTTGAGTATGTTGTGGCTTCATTTTCATCAAACTCTAAAAA
GTCTTTAATTTCTTTCTTTATTCCTTCCTTGACCAATGTATCTTTGAAGA
AAGTGTTGTTCAGTTTCCACATGGATTGGTGTCTTTTCCCTTATTTACGG
TGTAATTGATTTTTATTTCCTTGTTGAACCCGACAGCACGGCACGTTTTA
TTTTCCCTTATTCTTTCATCTGGTTGAGGCCCGTTTCTGTGTCTTTTTTT
TACGTCCATTTTCCTTTCAATTTTCCCN

CGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCAGCAAACCATATTCATTGAGAAAAACCCATTTTCC
TCCTTGCAAGCCACATACAATCAGCAAACACCGACACAGCAGATATGCTT
TTAATTAGAGACAAACTCATTGGGAAGGGGTCTGACTTCCCTGTTCCTTT
TTATTTGCAGAGAAAATGACAATCTACTGGGTACTGAATGGTATTTGAAA
GGCCGGGTGCACAAATCTCTGCCCACCAGAAGTATATTTACACTCAAGTC
AACTAAAATGATACAAGAAATGTTTTATGCAGAAATAATAGAGGTGTATC
CCCAAAAGCCTGCCCAATGGCAGAAACGAGCACCACATACATTTGGATGA
TACTAGATAACACATCACTTCATTTTTCCATGAGAAAAATTTTGTCCCTA
AAAGTATAGACTAGAAAAATTTAATGTTAGCATTTAATGAGTTCTGTTTC
TTGGATTCAGTCTCAAGCCCACACACATTGATGAATTTTTTAACCAATAA
GTTATCCTCTCATAGTTAATAATCAAAGAGCCAAATATTATATTCATTTA
TCCTATGATGTTATTAATATACCATTATAAATAACTGACCTTTTCCTGAA
TTCCAAATTATTCTCATATAGAAATATATGGATGCACAGCTTATTATACT
ATATATAACACGATTGAGGTGGTAAAAAAGTCTCACCATATTTTCTCCCA
ACGGCCCCAATTTGCTTCG

Query= MSMg01no401_m23.g1 MSMg01no401_m23.g1 CHROMAT_FILE:
MSMg01no401_m23.g1 PHD_FILE: MSMg01no401_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:31 2005
         (568 letters)



>mm_chr2_53837904_53838871
          Length = 968

 Score = 1052 bits (544), Expect = 0.0
 Identities = 562/568 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tattcattgagaaaaacccattttcctccttgcaagccacatacaatcagcaaacaccga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tattcattgagaaaaacccattttcctccttgcaagccacatacaatcagcaaacaccga 709

                                                                       
Query: 61  cacagcagatatgcttttaattagagacaaactcattgggaaggggtctgacttccctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 cacagcagatatgcttttaattagagacaaactcattgggaaggggtctgacttccctgt 649

                                                                       
Query: 121 tcctttttatttgcagagaaaatgacaatctactgggtactgaatggtatttgaaaggcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tcctttttatttgcagagaaaatgacaatctactgggtactgaatggtatttgaaaggcc 589

                                                                       
Query: 181 gggtgcacaaatctctgcccaccagaagtatatttacactcaagtcaactaaaatgatac 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 588 gggtgcacaaatctctgcccaccagaagtatatttatactcaagtcaactaaaatgatac 529

                                                                       
Query: 241 aagaaatgttttatgcagaaataatagaggtgtatccccaaaagcctgcccaatggcaga 300
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aagaaatgtgacatgcagaaataatagaggtgtatccccaaaagcctgcccaatggcaga 469

                                                                       
Query: 301 aacgagcaccacatacatttggatgatactagataacacatcacttcatttttccatgag 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aatgagcaccacatacatttggatgatactagataacacatcacttcatttttccatgag 409

                                                                       
Query: 361 aaaaattttgtccctaaaagtatagactagaaaaatttaatgttagcatttaatgagttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaaaattttgtccctaaaagtatagactagaaaaatttaatgttagcatttaatgagttc 349

                                                                       
Query: 421 tgtttcttggattcagtctcaagcccacacacattgatgaattttttaaccaataagtta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtttcttggattcagtctcaagcccacacacattgatgaattttttaaccaataagtta 289

                                                                       
Query: 481 tcctctcatagttaataatcaaagagccaaatattatattcatttatcctatgatgttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcctctcatagttaataatcaaagagccaaatattatattcatttatcctatgatgttat 229

                                       
Query: 541 taatataccattataaataactgacctt 568
           |||||||| |||||||||||||||||||
Sbjct: 228 taatatacaattataaataactgacctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space:   534564
Effective search space used:   534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)