Query= MSMg01no402_c16.b1 MSMg01no402_c16.b1 CHROMAT_FILE:
MSMg01no402_c16.b1 PHD_FILE: MSMg01no402_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:58 2005
(364 letters)
>mm_chr2_29676143_29676903
Length = 761
Score = 572 bits (296), Expect = e-168
Identities = 324/336 (96%), Gaps = 6/336 (1%)
Strand = Plus / Minus
Query: 32 gggatcaaatggtccttagaaaaagcagcaagccctttt---ttttttgtttgtttgttt 88
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 761 gggaccaaatggtccttagaaaaagcagcaagcccttttttgttttttgtttgtttgttt 702
Query: 89 tggtttttggagacagggtttctctgtgtagccctgctatcctggaactcactctgtaga 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tggtttttggagacagggtttctctgtgtagccctgctatcctggaactcactctgtaga 642
Query: 149 ccaggctggcctcaaactcagaaatccgcctgcctctgcctcccaagtgctgggattaaa 208
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ccaggctggcctcgaactcagaaatccgcctgcctctgcctcccaagtgctgggattaaa 582
Query: 209 ggcgttcgccaccactgcccatcaccccaacagttctgatgggagtccctttcaggaact 268
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ggcgtgcgccaccactgcctatcaccccaacagttctgatgggagtccctttcaggaact 522
Query: 269 tgatgattccgagttcaggcttcatctgaacagaagaagtctctgcaaagaactcatgct 328
|||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 521 tgatgaatccaagttcaggcttcatctgaacagaag---tctctgcaaagaactcatgct 465
Query: 329 ggcagcactgagcctgatgctactgccacttcgcgt 364
||||||||||||||||||||||||||||||||||||
Sbjct: 464 ggcagcactgagcctgatgctactgccacttcgcgt 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 761
Length adjustment: 9
Effective length of query: 355
Effective length of database: 752
Effective search space: 266960
Effective search space used: 266960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_c16.g1 MSMg01no402_c16.g1 CHROMAT_FILE:
MSMg01no402_c16.g1 PHD_FILE: MSMg01no402_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:58 2005
(127 letters)
>mm_chr2_29474236_29474762
Length = 527
Score = 246 bits (127), Expect = 5e-70
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1 catcttagctaaaaacagtgagcagggagcgcccttccctgtatctcttgtcttgctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcttagctaaaaacagtgagcagggagcgcccttccctgtatctcttgtcttgctaaa 260
Query: 61 acgtattgctcactaatacttaatgatatgatttgactctccaacctattcatgagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgtattgctcactaatacttaatgatatgatttgactctccaacctattcatgagcttg 320
Query: 121 tttgaag 127
|||||||
Sbjct: 321 tttgaag 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 527
Length adjustment: 8
Effective length of query: 119
Effective length of database: 519
Effective search space: 61761
Effective search space used: 61761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
