XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGAGATCTTCCCGCCTGCCTCTGTTAAGCAAAGACAACAAGCTGGCTGGA
TGGGACCTTCTCCTGAAATTACCATTTCTACCACACCTGGGCTTAACCCT
GCTCTGTCCCAGGCTTACTATGAACTCAGATATCTGTCTGCCTTTGTATG
TTGGCTCACAGCACACCTGCATTTGTTCTTTTAGATCCATCAAATGCCTC
ATACAATTCATATTGCATCCTCGTTGAGAAATTATATATTTTCAACTCTT
GATTTTAGAGTACTTTTCCACATCCTTAAGAGCTGTCCTGAAGGTCCCAG
GAGTTACCATTTTGCTGAGACATTAGCCACACCTTTGCCTTTCACACTCA
TGATGTCTTGGATTATCATGGAGTCATTAATGTTAACAGGGAGGACATTC
CTCGCAGGAATATGAAACTATGGAATTGTTATACAAACAAACCTTATACC
CACAGCACCCATCGACACCTGATGGCCCTGTCCCAGGGGCAGGAACCATG
TTATTCTGTCCCTATCAAAGCCATTCTGGTCTGATACCCAATATAGGAAT
TCATGACAAAAGATGCATTATTTAATGCAAGTCTCAAGTAACCCAATTCT
GTTTCAGCCATGTCAGATGGGAACCTTGAACCCTTGCTGTTACCACGTAT
CCATCTATTTCCCTGCCTAATAACCCTCTTGTGATCTGCTGCCTAATTGC
CCAGCTAA

TGCAGTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGGCACTCAGGACAGGTACTGGGATAGAGG
AAAAAAGGTCCAAGGAACAGCTGTGCAACAAATTCTTTTATTTATTTATT
TTTTGCCCTGGGTGTGTGTTTGCTATAACTGCACATGTGAGCCTGATATG
TGATGCCACTATACCTGTGTACATGAGTGCCTGTTGTGTGATGCTGCTGC
ACATGTGTCCATGTGTACCTGGTGTGTGATGCCACTTTACATGTGGGCCA
GGTGTGAGATGCCACTGTGTTCATGTGTGCCTGGTGTGTGATGCTGCTGC
ACCTATGAACATGTGTGCCTGGTGTGTGATGCCACTGTACATGTGTCCAT
GTGTGCCTGGTGTGTGATCCTTTTTTTTTCTTACATATTTTGTTAATTTA
TATTTCAAAGGCTATCCAGAAAGTCCCCTATACCCTTCCCCCTTGCTGCT
CCCCAACCCACCCACTCCTGCTTTCTGGCCCTGGCATTCCCTTGTATTGG
GGCATATAATCTTCGAAAGACCACAGTGTCTCTCTTCCCATTGATGGCCT
TATTTGATCATCCTCTGCTCCTTATGCCACTATATACTTGAACCTCTGGT
GTTCACTTGTTTTTTTCTCCCATGCTTGTTCCCCTCCATCTGTCCTCCTT
ACCCCCCTCTCCTCTCCTGGGTCACTTTCTCTTATATTTCCCCAATGTGC
TGTTCCTGCGTTTCTTTTG

Query= MSMg01no402_l08.g1 MSMg01no402_l08.g1 CHROMAT_FILE:
MSMg01no402_l08.g1 PHD_FILE: MSMg01no402_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:42 2005
         (390 letters)



>mm_chr2_56554629_56555422
          Length = 794

 Score =  673 bits (348), Expect = 0.0
 Identities = 384/406 (94%), Gaps = 18/406 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggcactcaggacaggtactgggatagaggaaaaaaggtccaaggaacagctgtgcaaca 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 412 tggcactcaggacaggtactgggatagaggaaaaaaggttcaaggaacagctgtgcaaca 353

                                                                       
Query: 61  aattct----tttatttatttattttttgccctgggtgtgtgtttgctataactgcacat 116
           ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aattcttttatttatttatttattttttgccctgggtgtgtgtttgctataactgcacat 293

                                                                       
Query: 117 gtgagcctgatatgtgatgccactatacctgtgtacatgagtgcctgttgtgtgatgctg 176
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 292 gtgagcctgatatgtgatgccactatacctgtgtacatgagtgcctgttgtgtgatgcag 233

                                                                       
Query: 177 ctgcacatgtgtccatgtgtac-------------ctggtgtgtgatgccactttacatg 223
           ||||||||||||||||||||||             |||||||||||||||||||||||||
Sbjct: 232 ctgcacatgtgtccatgtgtacctggtgtgtgtgtctggtgtgtgatgccactttacatg 173

                                                                       
Query: 224 tgggccaggtgtgagatgccactgtgttcatgtgtgcctggtgtgtgatgctgctgcacc 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tgggccaggtgtgagatgccactgtgttcatgtgtgcctggtgtgtgatgctgctgcacc 113

                                                                       
Query: 284 tatgaacatgtgtgcctggtgtgtgatgccactgtacatgtgtccatgtgtgcctggtgt 343
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 112 tatgaacatgtgtgcctggtgtgtgatgtcactgtacatgtgtccatgtgtgcctggtgt 53

                                                         
Query: 344 gtgatcctttttttttcttacatattttgttaatttatatttcaaa 389
           ||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 52  gtgatcc-ttttttttcttagatattttgttaatttatatttcaaa 8


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 794
Length adjustment: 9
Effective length of query: 381
Effective length of database: 785
Effective search space:   299085
Effective search space used:   299085
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)