Query= MSMg01no403_c13.b1 MSMg01no403_c13.b1 CHROMAT_FILE:
MSMg01no403_c13.b1 PHD_FILE: MSMg01no403_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:20 2005
(619 letters)
>mm_chr2_144527453_144528471
Length = 1019
Score = 741 bits (383), Expect = 0.0
Identities = 418/439 (95%), Gaps = 18/439 (4%)
Strand = Plus / Minus
Query: 191 gcttagtctctgctacctagcacaataaccactagacatacatagcacacaatag----t 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gcttagtctctgctacctagcacaataaccactagacatacatagcacacaatagccaa- 961
Query: 247 tttttttt----atatgtagcatatgacagccactagacatatgtagcacatgatag--a 300
| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 960 -------tagacatatgtagcatatgacagccactagacatatgtagcacatgatagaca 908
Query: 301 ctggatacatgtagccatggagcacttaaaacataatcctgtgactgaacagaattttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ctggatacatgtagccatggagcacttaaaacataatcctgtgactgaacagaattttaa 848
Query: 361 gtctttttaattcttataaatttaaactcccctggcttcatggtcctgggtcagccattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gtctttttaattcttataaatttaaactcccctggcttcatggtcctgggtcagccattc 788
Query: 421 caggcactttgacccttctttcagttaccaggacttcagcctttttcctgtcatgtgttc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 caggcactttgacccttctttcagttaccaggacttcagcctttttcctgtcatgtgttt 728
Query: 481 acttctgtaaaccacactggctctagacacattgtggggtcagaggtgctgctcccaagg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 gcttctgtaaaccacactggctctagacacattgtggggtcagaggtgctgctcccaagg 668
Query: 541 tgatcagttaagcaaaaggagaagccaaatatatgtctgttgagcatgatccatgggaaa 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tgatcagttaagcaaaaggagaagccaaatatatgtctgttgagcatgatccatgggaag 608
Query: 601 gcacaacttttattataac 619
|||||||||||||||||||
Sbjct: 607 gcacaacttttattataac 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_c13.g1 MSMg01no403_c13.g1 CHROMAT_FILE:
MSMg01no403_c13.g1 PHD_FILE: MSMg01no403_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:20 2005
(193 letters)
>mm_chr2_144359274_144359867
Length = 594
Score = 366 bits (189), Expect = e-106
Identities = 192/193 (99%), Gaps = 1/193 (0%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctggcctcgaactcagaaatctgcctgcttctgccctccaagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggctggcctcgaactcagaaatctgcctgcttctgccctccaagtgc 260
Query: 61 tgggattaaaggtgtgcgccaccgaagtgaaactatcaggaagatgagattagggtaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggtgtgcgccaccgaagtgaaactatcaggaagatgagattagggtaaaa 320
Query: 121 gattggaaaggagatgtgatgtaagctaattcaaccatgttcgtggtttgtgtggtggg- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattggaaaggagatgtgatgtaagctaattcaaccatgttcgtggtttgtgtggtgggg 380
Query: 180 ttttttttttttt 192
|||||||||||||
Sbjct: 381 ttttttttttttt 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 594
Length adjustment: 8
Effective length of query: 185
Effective length of database: 586
Effective search space: 108410
Effective search space used: 108410
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
