Query= MSMg01no403_e17.b1 MSMg01no403_e17.b1 CHROMAT_FILE:
MSMg01no403_e17.b1 PHD_FILE: MSMg01no403_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:31 2005
(481 letters)
>mm_chr2_128680874_128681754
Length = 881
Score = 671 bits (347), Expect = 0.0
Identities = 420/459 (91%), Gaps = 24/459 (5%)
Strand = Plus / Minus
Query: 25 taatagaatctgatgccctcttctggtgtgtctgaagacggctacagtgtatttacatac 84
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 881 taatagaatctgatgccctcttctggagtgtctgaagacggctacagtgtatttacataa 822
Query: 85 aataataaataaatctttagaacaagttgtccttaaactcactgagatccacgtgccttt 144
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 821 aataataaataaatctttagaacaagttgtccttaaactcactgagatccacgtgcctct 762
Query: 145 gccttaggagtgctgagattaaagacatgctccaccacacccagattttatttatacaca 204
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gccttaggactgctgagattaaagacatgctccaccacacccagattttatttat----- 707
Query: 205 cacacacacacacacacacacacacacacacacac--aaggcgctgtcctgttttatgta 262
|||||||||||||||||| |||| |||||| ||||||||| |
Sbjct: 706 -----------------acacacacacacacacacttaaggtgctgtcatgttttatgaa 664
Query: 263 tttatttttaatgtgcttcccttttaaagaaaactgtaggaaaacacagagaagtaggga 322
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 663 tttatttttaatgtacttcccttttaaaaaaaactgtaggaaaacacagagaagtaggga 604
Query: 323 cagagattcaagttgcccatagtctactatcctaaacaacctagtattagttgtgttcta 382
||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 603 cagagcttcaagttgcccatagtctactaacctaaataacctagtattagttgtgttcta 544
Query: 383 cagaactagaacagtggtaggcccatgacatgtcacttcctaaactaactggcagacaga 442
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 543 cagaactggaacagtggtaggcccatgacatgtcacttcctagactaactggcagacaga 484
Query: 443 ctggtgtggccatatgactataagacactatactcagaa 481
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 483 ctggtgtggccatatgactacaagacactatactcagaa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_e17.g1 MSMg01no403_e17.g1 CHROMAT_FILE:
MSMg01no403_e17.g1 PHD_FILE: MSMg01no403_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:32 2005
(497 letters)
>mm_chr2_128489130_128490025
Length = 896
Score = 930 bits (481), Expect = 0.0
Identities = 493/497 (99%), Gaps = 1/497 (0%)
Strand = Plus / Plus
Query: 1 aagaccagcctgggctacgtacacagcaagaccttgactttaaaaaagacaaaaagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaccagcctgggctacgtacacagcaagaccttgactttaaaaaagacaaaaagaaaa 260
Query: 61 gaaaaaaaggtaaattgtgcttaaacagattttttaataaagactcaaaacctactaagt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gaaaaaaaggtaaattgtgcttaaacagatttttaaataaagactcaaaacctactaagt 320
Query: 121 atttgattcatgctatataggacaacaggccttagtattatcccgacatattctaaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttgattcatgctatataggacaacaggccttagtattatcccgacatattctaaggct 380
Query: 181 tacctattattaagtttgtcaggtcctcacagttatatagccagttatacaagcactgca 240
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 381 tacctattattaagtttgtcaggttctctcagttatatagccagttatacaagcactgca 440
Query: 241 tttctatacaggataatgaagaaaacaactgtagttacttacacttcgggtccatgctaa 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcta-acaggataatgaagaaaacaactgtagttacttacacttcgggtccatgctaa 499
Query: 301 gcggtctgtgttataacccatcatgttcaagagacaaatcacaaataaactccactctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gcggtctgtgttataacccatcatgttcaagagacaaatcacaaataaactccactctga 559
Query: 361 gtgacagctgggtcctcctggagcactgtgcacattgtaccacttgacgagcacctgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgacagctgggtcctcctggagcactgtgcacattgtaccacttgacgagcacctgaat 619
Query: 421 ggctacttcttttggcaggatgaacttaattgcttgcagacacgtttgtactattaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggctacttcttttggcaggatgaacttaattgcttgcagacacgtttgtactattaaaag 679
Query: 481 caaatactgattttagt 497
|||||||||||||||||
Sbjct: 680 caaatactgattttagt 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 896
Length adjustment: 10
Effective length of query: 487
Effective length of database: 886
Effective search space: 431482
Effective search space used: 431482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
