TGCGGTCGCTATACGACTCACTATTTCCAGAGAATCCGCGGAATTCAGGG
CTCTGTCTGTTAAACAAGCTCTCAAGGTAAAAAAAAAAATTGTAGCTAAA
AGTTTTAGAAGTATTGTTCTTCAAAGCTGCACAGAGCACATAATCAGCCC
TCGTGTATGGTGTCTATGTGAATAAATTCAACCAATCGCAGAGAAAATCT
GTTCATTTTTTTATCAGTGCTGAACATATGAAGACACTTTTTCTTGTCAT
CATCCCCTAAATAACACAGGATAATCAATATTTACATGTGATTATATTGT
ACTTCATACAAGTAAACTCTTAGGAGAGAGGTCTGTGTCATTTTTTTTAA
AGTGTCACAAAAGATGTATAAAGACAAAAGTCCAGCCAAGTTGCCCTAAA
GACCTTCAGAAGTCTTTTCTTTGTGATTCTACAGCGGGATAATACCTTGC
TCTCTAAAGTAGAAGGAGTGTGTGAATGGACGTAGCAAAGGAAATGGGCT
GTTCAGACAGCAAAAGGCACAGGAAATAAGGAATAGAGAGTGGAAAGCAG
GTGTCACCATTATCCCCTTATAGGATAAAGCAGAACCGACCTCATCATGC
CCGTTAAAGCTAACTTGTCTGGGCACATTAGTTATCTCTCTCTCATCTTC
TCCCCCCCTTATATATACAAACCATTTTTCAAAGGTTAGATAAAAAATTT
AACTGTTGGTTGGGTGACTTGTTATTCTACCCCCAACTGATTTTATTTTC
TTT

GTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCATGCACTCCCAGTGGGAACATAAAATATTTAACA
ATGCTTTTTTTTTTTTTTGTAGGTCTGATGACATACCAGAGACAAATAAA
AGCATTATTTGTAACAAAAAACACAAAGGAGTTTCACAGCAACATCATTC
AAAATAACCAAAACATAGAGATAAACCAAGTATCAACTGATGTGTGTATT
GTGGTATATTTTTTGTCATTAAAAGGAAAAATAATCCCTTTTATCAAATC
AAATGATCTCTATTTTTATTACAAGCATGTAGGTAACTCTACTAAAGACA
CACAGAGAGAAAATAGGGGATGCTTACAAGCTGAGACTTTCTTTTTCTTT
CTTTTTTTTTAAATAATTCTGTCTATTTTTACTAGCTATTTTCTTTATTT
ACATTTCAAATGTTATCCCCTTTCCTAGTTTCCCCTCCAAAAATCCCCTA
TCATCTACCCCCTCCCCCTGCTCCCCAATTCACCTACTCCTGCTTCCTGG
CCCTGGCATTCCCCTATACTAGGGCATAAAGTCTTCACAGGACCAAGGGG
CTCTCCTTCCATTGATGACTGACTAGGTCACCCCTTGCTACATATGTATC
TGGAGCCTTGAATTCCACCATGTGTCTTTCTCTGACTGGCGTTTAATTCC
CCCTGATGACTTGGTGTACCGGTCTTTTCCCTCCTGTTGGTTC

Query= MSMg01no404_g01.b1 MSMg01no404_g01.b1 CHROMAT_FILE:
MSMg01no404_g01.b1 PHD_FILE: MSMg01no404_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:02 2005
         (464 letters)



>mm_chr2_136563072_136563935
          Length = 864

 Score =  818 bits (423), Expect = 0.0
 Identities = 452/463 (97%), Gaps = 5/463 (1%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcagggctctgtctgttaaacaagctctcaaggtaaaaaaaaaaa---ttgtagct 62
           |||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 203 gaattcagggctctgtatgttaaacaagctctcaaggtaaaaaaaaaaaaaattgtagct 262

                                                                       
Query: 63  aaaagttttagaagtattgttcttcaaagctgcacagagcacataatcagccctcgtgta 122
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaa-gttttagaagtattgttcttcaaagctgcacagagcacataatcagccctcgtgta 321

                                                                       
Query: 123 tggtgtctatgtgaataaattcaaccaatcgcagagaaaatctgttcattttttt-atca 181
           |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 tggtttctatgtgaataaatgcaaccaatcgcagagaaaatctgttcattttttttatca 381

                                                                       
Query: 182 gtgctgaacatatgaagacactttttcttgtcatcatcccctaaataacacaggataatc 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgctgaacatatgaagacactttttcttgtcatcatcccctaaataacacaggataatc 441

                                                                       
Query: 242 aatatttacatgtgattatattgtacttcatacaagtaaactcttaggagagaggtctgt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatatttacatgtgattatattgtacttcatacaagtaaactcttaggagagaggtctgt 501

                                                                       
Query: 302 gtcattttttttaaagtgtcacaaaagatgtataaagacaaaagtccagccaagttgccc 361
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtcatttttttttaagtgtcacaaaagatgtataaagacaaaagtccagccaagttgccc 561

                                                                       
Query: 362 taaagaccttcagaagtcttttctttgtgattctacagcgggataataccttgctctcta 421
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 562 taaagaccttcagaagtcttttatttgtgattctacagcgggataataccttgctctcta 621

                                                      
Query: 422 aagtagaaggagtgtgtgaatggacgtagcaaaggaaatgggc 464
           ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 622 aagtagaaggagtgtgtgaatggacatagcaaaggaaatgggc 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)