GXXXXXXXXXXXXXXXXXXXXXXTTCANAAATCCGCGGAATTCTGAGGTC
CTTGCAGAGAATCTACTATTATAACTTTACTAAACAGACATAGCATCAAA
CTGATGTCTACATATATTTCTGTACTCATAGATTAGTACAGTACTAATCA
GGAAAGTATTTTCACAATGGACAGCAATCAATAAAGAGACTCCAAGTGAT
CAAAGAAAACAAGTGCTTTTGGAGTATGTAAACATGAATGGGGGCATCTG
TACCACTCTCTTTCATCCCAATACTTATAAAGCATCATGGAAGATAGGGA
AAAATGACTGTAAGATTTTGAGGTTGGCAAGCACTGGGGCTAAAAAGGAC
CTTCTGGACATGTCAGGACAGTTGTCCTCATGAACTCACAGTGGCTATGG
TTACTGGCTCAAGACCTATACAAGAACACCACTGTGGCCATCTGCAGCCA
CATGAACTGGGTCCTCCTGAAAGGCAGGCTGGGGCTAANAGAGAATAAAT
GGTGAGAAAAAGATGAGGCCCAGACAAATACTGATCAAAGTCCCAAGTTA
CTAAAAATCTGTGCTTATATAGGGGGAAAGCCCATCTCCCCATATCCCCC
CCCTTTTTTTTTTTTTTTTTTTTTGGAATTCGAAAAAAGAGTCCCCTTTT
TATCTTTTTTATTCTTTTTATATACTTTCTAATTTCGAAGCCCTGCCTCC
TTATATTGCTTTCTCCCCCTCTTTATCGTTTTTTTATTTACCGATCCCCT
TTTTTTCTTTTTTT

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCAGACTACAGAGAGATAATTGTACTTTGCACCAAG
AAAATAATATAAACTATATAATTAGAGAATATTTGAGTAATAATCACTTA
ATCAAGTATGGGGGTCAATTTCAAAATAGATTTTAAAATTTGAAATTTGG
GAGAATTTGAGCCTCTTTGAATTTGAGAGCATCATGATACGTGTTCTTCT
ATTCTGTACTATATTCTAATTTTAACGTTTTTCTGAGTTCTTTTTCATGA
TCCCTAAAATACAAATATTGTTCAAGAATCGAGTATAGACAGTACAGAGT
CTCAATCATAATAAGCAGACTTCATCCTCTCATGAGGAAAGTCATTCAGG
ACCATTACTCTTGTTGGTGTGCTACTGATCAGAGGAGACTAGTACATAGA
CTAAAGCCACAAAACTGTCCTTTCTAGATTCCTTCCAGAGAATTCTGCAG
ACTGATATGATTGGGGCTTCTGTCCTAAAAAGGCAGGGACTAAAGATGAA
AGCAAGAGGCTTAGGACAAAGACTTATGCCAAGAAATGGATATTACGACC
CGGGAGGAAAAATTGGGACATTTACCCTTACAGTTCCAATGTCTGGCCTG
GAAGCTTTACTAAAGGGGTCCTTTTATAACTTTTCACACCTCCTTCTCTA
AAGAAATCTAAACCTTGGAAAAGGGGGCCTGGATTTTGTTGTGTCTTTTT
ATAAAAAAATTTTTGCGCCCCGTTTTTTTTTGCCTCTTGGGATTTT

Query= MSMg01no404_o21.g1 MSMg01no404_o21.g1 CHROMAT_FILE:
MSMg01no404_o21.g1 PHD_FILE: MSMg01no404_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:46 2005
         (424 letters)



>mm_chr2_138493400_138494230
          Length = 831

 Score =  772 bits (399), Expect = 0.0
 Identities = 420/431 (97%), Gaps = 7/431 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagactacagagagataattgtactttgcaccaagaaaataatataaactatataatta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tcagactacagagagataattgtactttgcaccaagaaaataatataaactatataatta 572

                                                                       
Query: 61  gagaatatttgagtaataatcacttaatcaagtatgggggtcaatttcaaaatagatttt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 571 gagaatatttgagtaataatcacttaatcaagtatgagggtcaatttcaaaatagatttt 512

                                                                       
Query: 121 aaaatttgaaatttgggagaatttgagcctctttgaatttgagagcatcatgatacgtgt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 511 aaaatttgaaatttgggagaatttgagcctctttgaatttgagagcatcatgatacatgt 452

                                                                       
Query: 181 tcttctattctgtactatattctaattttaacgtttttctgagttctttttcatgatccc 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 451 tcttctattctgtactatattctaattttaacatttttctgagttctttttcatgatccc 392

                                                                       
Query: 241 taaaat-------acaaatattgttcaagaatcgagtatagacagtacagagtctcaatc 293
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 taaaatacaaataacaaatattgttcaagaatcgagtatagacagtacagagtctcaatc 332

                                                                       
Query: 294 ataataagcagacttcatcctctcatgaggaaagtcattcaggaccattactcttgttgg 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ataataagcagacttcatcctctcatgaggaaagtcattcaggaccattactcttgttgg 272

                                                                       
Query: 354 tgtgctactgatcagaggagactagtacatagactaaagccacaaaactgtcctttctag 413
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tatgctactgatcagaggagactagtacatagactaaagccacaaaactgtcctttctag 212

                      
Query: 414 attccttccag 424
           |||||||||||
Sbjct: 211 attccttccag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 831
Length adjustment: 9
Effective length of query: 415
Effective length of database: 822
Effective search space:   341130
Effective search space used:   341130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)