Query= MSMg01no405_d20.b1 MSMg01no405_d20.b1 CHROMAT_FILE:
MSMg01no405_d20.b1 PHD_FILE: MSMg01no405_d20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:10 2005
(511 letters)
>mm_chr2_85685104_85686014
Length = 911
Score = 915 bits (473), Expect = 0.0
Identities = 483/489 (98%), Gaps = 5/489 (1%)
Strand = Plus / Minus
Query: 22 ctgttttacataaagaattccactaaagtcagggatgcagagtgagaccttctatcacaa 81
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ctgttttacataaagaatttcactaaagtcagggatgcagagtgagaccttctatcaca- 775
Query: 82 aatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatga 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ----aaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatgaaatga 719
Query: 142 aatgaaataatgaaataactttcagtgtttacaacatatcatcatcacagtacagtatgg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aatgaaataatgaaataactttcagtgtttacaacatatcatcatcacagtacagtatgg 659
Query: 202 gcaaataaacctgcacatgtttttatcactgatctcaaaggaaaataaaattccttgggg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gcaaataaacctgcacatgtttttatcactgatctcaaaggaaaataaaattccttgggg 599
Query: 262 gatggcacttatgcatatctctgagtctctgctgaatgtagaaagtcatttcatgatgtt 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gatggcacttatgcatatctctgagtctctgctgaatgtagaaagtcatttcatgatgtt 539
Query: 322 tcttctagaaaacaatgcatgattctgagaattaaatacccccttcacacaggcataaca 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tcttctagaaaacaatgcatgattctgagaattaaatacccccttcacacaggcataaca 479
Query: 382 gcaggatgaacaaggggctctgaaacaaatgcaaggaggactcacagtctttcaattagt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gcaggatgaacaaggggctctgaaacaaatgcaaggaggactcacagtctttcaattagt 419
Query: 442 tacagaacattcactcaacaagactgtccatctaagaagaagaaagcttcagcctgctac 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacagaacattcactcaacaagactgtccatctaagaagaagaaagcttcagcctgctac 359
Query: 502 tgacatgta 510
|||||||||
Sbjct: 358 tgacatgta 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_d20.g1 MSMg01no405_d20.g1 CHROMAT_FILE:
MSMg01no405_d20.g1 PHD_FILE: MSMg01no405_d20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:10 2005
(118 letters)
>mm_chr2_85513220_85513737
Length = 518
Score = 228 bits (118), Expect = 7e-65
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1 actagagggttaaggcattgagttcacatgaaggtttaaggaaattggctcattgtcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagagggttaaggcattgagttcacatgaaggtttaaggaaattggctcattgtcagg 260
Query: 61 ggtaccaactatttgatcctccagggtttctggcagcatcataaacagctttgttagg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtaccaactatttgatcctccagggtttctggcagcatcataaacagctttgttagg 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 118
Length of database: 518
Length adjustment: 8
Effective length of query: 110
Effective length of database: 510
Effective search space: 56100
Effective search space used: 56100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
