NTTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTATTTTTACTTGAACCCTATTTTTAAACTTGCATATTTG
TTTTCTTGGTATTTCGTTCTTTATATGACTGAGGTATTAGTCTCTATCAT
ATGTGGAGTTTATAAAGTTCTTTTTATTCAACAGTCTCTTTATCATTCAG
AAGCTTATCAGTTTCATGAGAACACATTTATTAATTGTTGATCTTAGTGC
CTGTGCTAACAGCATTCTGTTTAGAAAGTCTTCCTGTGCCAATGAGTTCA
AGGCTACCTCTCAATTTCCCTTCTATTTTTTTTAGTGTACCTAAAACTGG
TTTCATGTTGAGGTCTTTGATCCATTTGGAATTGAGTTTTGTGCAGGTGC
TAAAGATGGATCTATTTGGATTCTGCTACTTGCAGAAAAAGTTTGACCAG
CACCATTTGTTGAAGATGCTATAATGTTTTTAATAAAAAAACAGGTGTGT
GGATTTATGACTGGTTCTTTAATTTTATTCAATTGATTAACATGTCTGTT
TCTATGTCAACAGAGTATTGGTTTTATTACCATATCTCTGTAGTANAACT
TGAAATCAGGGATGGTGGATCCAGGTGTTTTTAAAATTTCTTTATATTTA
AGGTTTAATGTGCATTTTAACTTATGGACGCAGGGATTTATGCCATATGG
CCCAATTTGGACCTGCTTAGGAAAGGCTTCTCAAGCCTCCTTGTGTATGG
GGAAG

TTTTCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATCACAACGTTCTGTTTG
TAGTACAAATTGCTTTATTAAGTATTGATGAAAATCCCTAAAAATACCCC
TCTATCTATCCAAAAGCTGGATGTAGCATTTGCATGAGTTATGAAAACTG
CTGTATATAATGAGTCGGAACACTGCCTCATGAATTCTGCAGTAAAAAAT
TACAGTCCAGCTCCATGAATGTAATTATTCAGGCACCCAGTCTGATTTAT
CATCTTCATGAGATGCTAAGCTATGAAATGTCTCCTGCTAGCAACCAGCC
TTCACTTATTTTGCAAATACACCCGAGAGAAGAAGAAGGGATGAAGAATA
ATAAATAAACAAGCAAACAAACAAAACAAATGACCTGCCAAGGTGAGAGG
AATCTTTATCTTTACTTCCAAAAGGCTGGTAATTTATAGTTAATTTTGAG
ATAATCAAATGGGAAAATTACACACTCCTGTATGTGTCTTGGGCAATAAA
AGCCTGACTCAGGGCTGGAGAGGTGAGCTTTCACAGTGCTTACTCCAAAG
CAAAACCTCAGGTGGGAATCAGAGGAGGAACTTCCAGGCTAGAGGCATGG
AAAAATCTGGTGCTGTCCAGGCAGAAGGCCTGACAGGCCACAGCTGGTAG
CTGATTAGTCCTTAGCAGGCAGTAAGATTCCCCACTGGTC

Query= MSMg01no405_k11.g1 MSMg01no405_k11.g1 CHROMAT_FILE:
MSMg01no405_k11.g1 PHD_FILE: MSMg01no405_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:42 2005
         (530 letters)



>mm_chr2_124083979_124084908
          Length = 930

 Score =  994 bits (514), Expect = 0.0
 Identities = 526/530 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttatcacaacgttctgtttgtagtacaaattgctttattaagtattgatgaaaatccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttatcacaacgttctgtttgtagtacaaattgctttattaagtattgatgaaaatccct 671

                                                                       
Query: 61  aaaaatacccctctatctatccaaaagctggatgtagcatttgcatgagttatgaaaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aaaaatacccctctatctatccaaaagctggatgtagcatttgcatgagttatgaaaact 611

                                                                       
Query: 121 gctgtatataatgagtcggaacactgcctcatgaattctgcagtaaaaaattacagtcca 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 610 gctgtatataatgagtcggaacactgcctcgtgaattctgcagtaaaaaattacagtcca 551

                                                                       
Query: 181 gctccatgaatgtaattattcaggcacccagtctgatttatcatcttcatgagatgctaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctccatgaatgtaattattcaggcacccagtctgatttatcatcttcatgagatgctaa 491

                                                                       
Query: 241 gctatgaaatgtctcctgctagcaaccagccttcacttattttgcaaatacacccgagag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gctatgaaatgtctcctgctagcaaccagccttcacttattttgcaaatacacccgagag 431

                                                                       
Query: 301 aagaagaagggatgaagaataataaataaacaagcaaacaaacaaaacaaatgacctgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aagaagaagggatgaagaataataaataaacaagcaaacaaacaaaacaaatgacctgcc 371

                                                                       
Query: 361 aaggtgagaggaatctttatctttacttccaaaaggctggtaatttatagttaattttga 420
           ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 370 aagatgagaggaatctttatctttacttccgaaaggctggtaatttatagttaattttga 311

                                                                       
Query: 421 gataatcaaatgggaaaattacacactcctgtatgtgtcttgggcaataaaagcctgact 480
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 310 gataatcaaatgggaaaattacacactcctgtgtgtgtcttgggcaataaaagcctgact 251

                                                             
Query: 481 cagggctggagaggtgagctttcacagtgcttactccaaagcaaaacctc 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagggctggagaggtgagctttcacagtgcttactccaaagcaaaacctc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space:   478400
Effective search space used:   478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)