Query= MSMg01no405_l14.b1 MSMg01no405_l14.b1 CHROMAT_FILE:
MSMg01no405_l14.b1 PHD_FILE: MSMg01no405_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:47 2005
(256 letters)
>mm_chr2_159722499_159723154
Length = 656
Score = 408 bits (211), Expect = e-118
Identities = 253/285 (88%), Gaps = 29/285 (10%)
Strand = Plus / Plus
Query: 1 gtttaaattatagattaataccatcctgtgctcttgttcttcccttgatatagaaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtttaaattatagattaataccatcctgtgctcttgttcttcccttgatatagaaacaat 260
Query: 61 agtgacttaaattcatgaaccccaacaacaaaagcagacagatatatatatatatatata 120
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 agtgtcttaaattcatgaaccccaacaacaaaagcagacatatatatatatatatatata 320
Query: 121 tatata--------------ctccttacttcttgcttttcttaaattctttcttcttccc 166
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatatatatatatatatactccttacttcttgcttttcttaaattctttcttcttccc 380
Query: 167 caagtgggaaaaacaaaacaaaacaaaacaaaa---------------acaaacaaatta 211
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 caagtgggaaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaaacaaacaaattt 440
Query: 212 aaaaaaaaaacattggaagtttcaaggaaggagtcaaagttgcta 256
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaaaaaaacattggaagtttcaaggaaggagtcaaagttgcta 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_l14.g1 MSMg01no405_l14.g1 CHROMAT_FILE:
MSMg01no405_l14.g1 PHD_FILE: MSMg01no405_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:47 2005
(335 letters)
>mm_chr2_159892008_159892742
Length = 735
Score = 632 bits (327), Expect = 0.0
Identities = 333/335 (99%)
Strand = Plus / Minus
Query: 1 aggcaacattggctgactgaggggaggggttgtggaaggaggcttctatctggacaacgg 60
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 535 aggcaacattggctgactgaggggaggggttgtagaagggggcttctatctggacaacgg 476
Query: 61 ggaggctctgattgaatgcagggacagggctcagggcctggggtttggtgacatgacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ggaggctctgattgaatgcagggacagggctcagggcctggggtttggtgacatgacact 416
Query: 121 ttgaatctgatctccaaagagccttattaagaaaacagtaaagctgagaattgcaccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttgaatctgatctccaaagagccttattaagaaaacagtaaagctgagaattgcaccagt 356
Query: 181 gtctccagcagactcccaagtccccactaatgactcctattatagctttccattgcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtctccagcagactcccaagtccccactaatgactcctattatagctttccattgcttcc 296
Query: 241 tgtttccccaagaaagtctcacattgtcatcccggcctgttaaacgttctgtgggcccat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgtttccccaagaaagtctcacattgtcatcccggcctgttaaacgttctgtgggcccat 236
Query: 301 tatcaaaatagcattttcagcttcattgaacacat 335
|||||||||||||||||||||||||||||||||||
Sbjct: 235 tatcaaaatagcattttcagcttcattgaacacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
