Query= MSMg01no406_o04.b1 MSMg01no406_o04.b1 CHROMAT_FILE:
MSMg01no406_o04.b1 PHD_FILE: MSMg01no406_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:21 2005
(316 letters)
>mm_chr2_114690294_114691008
Length = 715
Score = 503 bits (260), Expect = e-147
Identities = 281/288 (97%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 29 actatctatacatgctctgcgtacaccaaaggcatcgatactatctatacatgctctgcg 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actatctatacatgctctgcgtacaccaaaggcatcgatactatctatacatgctctgcg 379
Query: 89 tacaccaaagggatcgatactttaggaccttaagaagctagctgtcacctaattgtctgt 148
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tacaccaaaggcatcgatactttaggaccttaagaagctagctgtcacctaattgtctgt 319
Query: 149 tttgggcatttagtggagcctctatctgcatttgtagggtttatcagctctatctgtttg 208
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tttggtcatttagtggagcctctatctgcatttgtagggtttatcagctctatctgtttg 259
Query: 209 tggagtatagtaagtcataagcaccacaatgtgtcttagttaatgttttgttgtgtgatg 268
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 258 t-gagtatagtaagtcataagcaccacaatgtgtcttagttaaggttttgttgtgtgatg 200
Query: 269 agactctatgaccatataattgatgctggcttacactttcagaggttt 316
|||| |||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 199 agacactatgaccatataattgaggctggcttacagtttcagaggttt 152
Score = 74.2 bits (38), Expect = 1e-17
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 68 actatctatacatgctctgcgtacaccaaagggatcgatact 109
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 594 actatctatacatgctctgcgtacaccaaaggcatcgatact 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 2
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_o04.g1 MSMg01no406_o04.g1 CHROMAT_FILE:
MSMg01no406_o04.g1 PHD_FILE: MSMg01no406_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:21 2005
(368 letters)
>mm_chr2_114534666_114535433
Length = 768
Score = 673 bits (348), Expect = 0.0
Identities = 363/368 (98%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 1 tcttagcttctttttgtttttctccttaccagaagaagcacagtagctatatgtgaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttagcttctttttgtttttctccttaccagaagaagcacagtagctatatgtgaatta 260
Query: 61 aaaaagatctataaattatatttttggtgaatacctaaaatataattgattattcagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaagatctataaattatatttttggtgaatacctaaaatataattgattattcagatt 320
Query: 121 aatagtaaacattcagaatgatttcaatattgtaaagcagatcatacttttcatctttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagtaaacattcagaatgatttcaatattgtaaagcagatcatacttttcatctttca 380
Query: 181 acttttggaaaacagattggatggagggatatatcaaagcaaatgcaaaaacatttttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttttggaaaacagattggatggagggatatatcaaagcaaatgcaaaaacatttttta 440
Query: 241 aaaatattttttattatgtattttcctcaattacatttccaatgctatcccaaaagtccc 300
||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 441 aaa-tattttttattatgtattttcctcaattacatttccagtgctatctcaaaagtccc 499
Query: 301 ccataccctccccccaactcccctacccacccattcccactttttggtcctggcgttccc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 500 ccataccctccccccaactcccctacccacccattcccactttttggccctggtgttccc 559
Query: 361 ctgtactg 368
||||||||
Sbjct: 560 ctgtactg 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
