Query= MSMg01no407_g18.b1 MSMg01no407_g18.b1 CHROMAT_FILE:
MSMg01no407_g18.b1 PHD_FILE: MSMg01no407_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:04 2005
(636 letters)
>mm_chr2_122065695_122066730
Length = 1036
Score = 1218 bits (630), Expect = 0.0
Identities = 636/640 (99%), Gaps = 4/640 (0%)
Strand = Plus / Minus
Query: 1 caaccacatggtggctcacaaccatccataatgaaatctaatgccctcttctggagtgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 caaccacatggtggctcacaaccatccataatgaaatctaatgccctcttctggagtgtc 614
Query: 61 tgaagacagctacagtgtacttacatataatt----aataaataaataaataaataaata 116
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 613 tgaagacagctacagtgtacttacatataattaataaataaataaataaataaataaata 554
Query: 117 aataaataaataaataaatatttttaaaaacacaagatcaaaacatatgctaatttatta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aataaataaataaataaatatttttaaaaacacaagatcaaaacatatgctaatttatta 494
Query: 177 gataatacttatttatagtatttatagtaagcaagaatatgcctgttagtagcaatggag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gataatacttatttatagtatttatagtaagcaagaatatgcctgttagtagcaatggag 434
Query: 237 aaggcttgtgcacatttttatataagtatttgtgctcttttatattgggctgataactct 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaggcttgtgcacatttttatataagtatttgtgctcttttatattgggctgataactct 374
Query: 297 ctgcaaaccttaaccaagtttcctatggttagaaatgatatatatatatatacatacaca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgcaaaccttaaccaagtttcctatggttagaaatgatatatatatatatacatacaca 314
Query: 357 cacatatacacatatacatacatatatagtttggagaaaacctctacattcaatgtcatt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cacatatacacatatacatacatatatagtttggagaaaacctctacattcaatgtcatt 254
Query: 417 atatatatacatatgtacatattcttcctccttaatatgtcataggatatttgaaaagga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atatatatacatatgtacatattcttcctccttaatatgtcataggatatttgaaaagga 194
Query: 477 atttcccctaatctatgagcccctttcttctcagaatagggttattttctcagaacatta 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atttcccctaatctatgagcccctttcttctcagaatagggttattttctcagaacatta 134
Query: 537 aaaccttatcagactggtacttccttctactttgatgggaagcagctctgtgcctcagga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 aaaccttatcagactggtacttccttctactttgatgggaagcagctctgtgcctcagga 74
Query: 597 cctttccagacaaaggcaatactttcttaagcatttgata 636
||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cctttccagacaaaggcaatactttcttaagcatttgata 34
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_g18.g1 MSMg01no407_g18.g1 CHROMAT_FILE:
MSMg01no407_g18.g1 PHD_FILE: MSMg01no407_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:04 2005
(462 letters)
>mm_chr2_121919945_121920806
Length = 862
Score = 893 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 catttttacaatgaaaaatggaagctacatgagggtccccttgacttaccaaaaagtccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttttacaatgaaaaatggaagctacatgagggtccccttgacttaccaaaaagtccc 260
Query: 61 gtatatttttatcagttgtataaaagcatatcttaagcaactcatcttccacactgaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatatttttatcagttgtataaaagcatatcttaagcaactcatcttccacactgaagc 320
Query: 121 cctaaaataaatgaaaaattaagaaaacaactttgtaatgaacctatttgaacataaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaaaataaatgaaaaattaagaaaacaactttgtaatgaacctatttgaacataaata 380
Query: 181 tgctagtcgcgaaaatgctctactgcagacaagtgtcctgctagaactgcacacctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctagtcgcgaaaatgctctactgcagacaagtgtcctgctagaactgcacacctcttc 440
Query: 241 tgttcttgggaatcttttcttcatcagttatatgtattgattgcttgtccccaaagccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttcttgggaatcttttcttcatcagttatatgtattgattgcttgtccccaaagccct 500
Query: 301 gattacttttccggagcaaaggcaacacacagaacaatttaagctaatgccaggcaacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattacttttccggagcaaaggcaacacacagaacaatttaagctaatgccaggcaacca 560
Query: 361 gagcccaagatgacaacaaattgctatggtggtttactagaaaataaaggttgggctgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagcccaagatgacaacaaattgctatggtggtttactagaaaataaaggttgggctgga 620
Query: 421 gagatggctcaatggttaagagcactgactgttcttccagag 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagatggctcaatggttaagagcactgactgttcttccagag 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
