CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTCATGTGATGCACCCGTGTTAGTCATGTGACAGTGTGACATCGAG
CAACTGCACAATAGCTGCAAGCCACTTGTGACACCTGTGCTTAGCCACTC
TCTTTCATCTTCGAAATGCATGGTGCTCTGACAAGGCCACCTACCTCAGG
CTCGCTGAGTCACAGGGCCTCAGGCAGCTCACATGACACAGGAGCACCTG
GGAAATAGTTTTCTTCATCACTTACCCCTCATGGCTTCAGCTTCTGTTTC
TCTCATTCCCTTTAGCACTTGCTTATTTACTATTTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGANTANTTTGNNNNTNN
NTTGNTTGTGTTTTTTGTTNTAATTNTTGTTTGTTTCTTTTTTTTTTTTT
TTCCTTGTTTAATCTGTTGTTTGAATTTTTGGTTGNTTTGCTTGTTTTTT
TGCCTTTTTTTTTTGTTTTTTTCTTTTCTGTTCTTTTTTTCTTGCTTTTT
CCTTGTCTTCTTCTTCCTTCTCTCCTTCTTCTTTCCCGTGTTCCTTCCCT
TTCTTTTTCTCCCTCTTTTTTTTCCCTTTTTCCTTTTTTTCTTCGTTCCG
CTTTTTTTCCTTCTCTGCCCCTTTCCTTTTTTTCCCCTTTTCTCTTCCCG
CCCCTCCTTTCTTTTGTTTCGCTCTCCTCTTCCCCCCCTTTTTGTTTCTC
TTCCCCTCTTT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA
GTCTGGCGGTTCCTCAGAAAACTGGACATAATACTACCGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGCTCCAACTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTANAAAGAATGAATTTA
TGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG
GTAACACATTCTCAAAGAAACTCACACCATATGTACTCACTGATAAGTGG
ATATTAGCCCCCAACCTAGGATACCCAAGATATAAGATATAATTTGCTAA
ACACATGAAACTCCANAAAAAAGAAAACTGAAGTGTGGACACTATGCCCC
TCCCTACATTTGGGAAG

Query= MSMg01no407_k21.b1 MSMg01no407_k21.b1 CHROMAT_FILE:
MSMg01no407_k21.b1 PHD_FILE: MSMg01no407_k21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:23 2005
         (341 letters)



>mm_chr2_168994165_168994905
          Length = 741

 Score =  636 bits (329), Expect = 0.0
 Identities = 335/337 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctcatgtgatgcacccgtgttagtcatgtgacagtgtgacatcgagcaactgca 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcatgtgaagcacccgtgttagtcatgtgacagtgtgacatcgagcaactgca 264

                                                                       
Query: 65  caatagctgcaagccacttgtgacacctgtgcttagccactctctttcatcttcgaaatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caatagctgcaagccacttgtgacacctgtgcttagccactctctttcatcttcgaaatg 324

                                                                       
Query: 125 catggtgctctgacaaggccacctacctcaggctcgctgagtcacagggcctcaggcagc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catggtgctctgacaaggccacctacctcaggctcgctgagtcacagggcctcaggcagc 384

                                                                       
Query: 185 tcacatgacacaggagcacctgggaaatagttttcttcatcacttacccctcatggcttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcacatgacacaggagcacctgggaaatagttttcttcatcacttacccctcatggcttc 444

                                                                       
Query: 245 agcttctgtttctctcattccctttagcacttgcttatttactatttgtgtgtgtgtgtg 304
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcttctgttcctctcattccctttagcacttgcttatttactatttgtgtgtgtgtgtg 504

                                                
Query: 305 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga 341
           |||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga 541



 Score = 97.4 bits (50), Expect = 1e-24
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                             
Query: 291 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 119



 Score = 97.4 bits (50), Expect = 1e-24
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                             
Query: 291 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 121



 Score = 95.5 bits (49), Expect = 4e-24
 Identities = 49/49 (100%)
 Strand = Plus / Minus

                                                            
Query: 292 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 340
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 123


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 100
Number of extensions: 47
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 10
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space:   243024
Effective search space used:   243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)