Query= MSMg01no408_c12.b1 MSMg01no408_c12.b1 CHROMAT_FILE:
MSMg01no408_c12.b1 PHD_FILE: MSMg01no408_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:02 2005
(620 letters)
>mm_chr2_63188493_63189511
Length = 1019
Score = 1145 bits (592), Expect = 0.0
Identities = 613/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Minus
Query: 1 ttgaatgacctctagaactcaataaagcaatgccaattaccaacaaatttgctgaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ttgaatgacctctagaactcaataaagcaatgccaattaccaacaaatttgctgaataat 760
Query: 61 gtcatgcatagcattattgacttttctaatgacacattgtttgtactttcaaaatgtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gtcatgcatagcattattgacttttctaatgacacattgtttgtactttcaaaatgtgta 700
Query: 121 catcaattattgacagaattattataatgacaaaaatgtcaatacaatctcattacataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 catcaattattgacagaattattataatgacaaaaatgtcaatacaatctcattacataa 640
Query: 181 gtgccacataaaaagatatacaacctgtttatcaacaaattgctgcaaggtgaaatagga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gtgccacataaaaagatatacaacctgtttatcaacaaattgctgcaaggtgaaataggc 580
Query: 241 ttttctttgctctgaagaacgacagtcacacaaaccaagggacaaatgaagggtatgcgt 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttttctttgctctgaagaacaacagtcacacaaaccaagggacaaatgaagggtatgcgt 520
Query: 301 gtaaacatttaattcattttaatataaaatagtggaggtaaatcctgcatatctttaaaa 360
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 519 gt-aacatttaattcattttaatataaaatagtggaggtaaatcctggatatctttaaaa 461
Query: 361 agaacaaacacaagtgatcttatataccatgatatgtgtcagaactcatagcatatgagt 420
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 460 agtacaaacacaagtgatcttatatacaatgatatgtgtcagaactcatagcatatgagt 401
Query: 421 tcgctgttattgctactgctaatatttattgagagaacacacttttgttattaactagct 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tcactgttattgctactgctaatatttattgagagaacacacttttgttattaactagct 341
Query: 481 tgtcagcttaaatataatttaaaatcactatttatgttctagttactgagtgctctcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtcagcttaaatataatttaaaatcactatttatgttctagttactgagtgctctcatt 281
Query: 541 tgaaaacatttcacgaatagatggatttctaagttttgctattgaaatattagcattgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgaaaacatttcacgaatagatggatttctaagttttgctattgaaatattagcattgtg 221
Query: 601 gacatgtgtgcttctttgga 620
||||||||||||||||||||
Sbjct: 220 gacatgtgtgcttctttgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1019
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1009
Effective search space: 615490
Effective search space used: 615490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_c12.g1 MSMg01no408_c12.g1 CHROMAT_FILE:
MSMg01no408_c12.g1 PHD_FILE: MSMg01no408_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:02 2005
(555 letters)
>mm_chr2_62994775_62995728
Length = 954
Score = 1027 bits (531), Expect = 0.0
Identities = 549/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 1 tcttgatttgaatgccacttgtgacaaagatatttaacgtgccatagtgtcaatgaattg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tcttgatttgaatgccacttgtgacaaagatatttaatgtgccatagtgtcaatgaattg 260
Query: 61 cttcatcaagaatatcaagactcttttgtcaagacagttgaaaacacctaaaaaatttac 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 cttcatcaagaatatcaagactcttttgccaagacagttgaaaacacctaaaaaatttac 320
Query: 121 ttagaaagaagaatgtaagcagacaggacagaatgattgataaaataaagtcacttaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagaaagaagaatgtaagcagacaggacagaatgattgataaaataaagtcacttaata 380
Query: 181 gcagtatattgtaacaagtcagcaataagaagttgcaaatcatcccaacaaaatttgaaa 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 gcagtatattgtaacaagtcagcaataaaaagttgcaaatcatcccaacaaaatttgaaa 440
Query: 241 tataaaacacactaattcatgcatttatggtatgctattcaattccttttttatcaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tataaaacacactaattcatgcatttatggtatgctattcaattccttttttatcaatta 500
Query: 301 gaatttcctttgcacacataagcaaggttctctagtgaattttctgcaagaatagataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatttcctttgcacacataagcaaggttctctagtgaattttctgcaagaatagataaa 560
Query: 361 taaagttactgcataaacctctgctaacggagatatgtttatgtttaagaatagaaaaaa 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 taaagttactgcataaacctctgctaatggagatatgtttatgtttaagaatagaaaaaa 620
Query: 421 caaaacctttcacactgtagcactaattgtattcatttccaaaaatgtctaaaatcctgg 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaacccttcacactgtagcactaattgtattcatttccaaaaatgtctaaaatcctgg 680
Query: 481 tgtcaccataatgtctaataattgagagacaatgttgggcttagttaattaatgcaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 tgtcaccataatgtctaataattgagagacaatgttgggcttagttaatta-tgcaattt 739
Query: 541 cttatcattcacaga 555
|||||||||||||||
Sbjct: 740 cttatcattcacaga 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
