Query= MSMg01no408_e21.b1 MSMg01no408_e21.b1 CHROMAT_FILE:
MSMg01no408_e21.b1 PHD_FILE: MSMg01no408_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:14 2005
(377 letters)
>mm_chr2_24474462_24475239
Length = 778
Score = 368 bits (190), Expect = e-106
Identities = 289/376 (76%), Gaps = 85/376 (22%)
Strand = Plus / Minus
Query: 5 gaattctgcatag---ttcaatggggatgcctttcagtacatagcacatattttgacctc 61
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaattctgcatagcaat--aatggggatgcctttcagtacatagcacatattttgacctc 297
Query: 62 ctacaaaacttaacttgaaaggggtcataaatttaaaatgataaaaacctctagaaggaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ctacaaaacttaacttgaaaggggtcataaatttaaaatgataaaaacctctagaaggaa 237
Query: 122 aaaagtgttgacaactgagattagtggagatttctctctctctctctctctctctctctc 181
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 agaagtgttgacaactgagattagtggagatttctctctctctctctctctctctctctc 177
Query: 182 tctctctctctctctctctctttctttctctctctctctctctctctctctctctctctc 241
||||||||||||||||||||
Sbjct: 176 tctctctctctctctctctc---------------------------------------- 157
Query: 242 tatctatctatctctatctctatctctatctctatctctcattaggatttctctgtatag 301
| | |||||||||||||||||
Sbjct: 156 ---------------------------------aac-------aggatttctctgtatag 137
Query: 302 ttctggatgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccacc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ttctggatgtcctggaactcactctgtagaccaggctggcctcgaactcagaaatccacc 77
Query: 362 tgcctctgcctcccaa 377
||||||||||||||||
Sbjct: 76 tgcctctgcctcccaa 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 778
Length adjustment: 9
Effective length of query: 368
Effective length of database: 769
Effective search space: 282992
Effective search space used: 282992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_e21.g1 MSMg01no408_e21.g1 CHROMAT_FILE:
MSMg01no408_e21.g1 PHD_FILE: MSMg01no408_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:15 2005
(409 letters)
>mm_chr2_24298631_24299439
Length = 809
Score = 791 bits (409), Expect = 0.0
Identities = 409/409 (100%)
Strand = Plus / Plus
Query: 1 atgtatttgggtagatgtatgctactgccaaagcaagacccctctgcaaaggcttctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtatttgggtagatgtatgctactgccaaagcaagacccctctgcaaaggcttctccc 260
Query: 61 cagaccagctcgctgtatttgcatcagaaagcccacaaagatcacctttgtgagaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaccagctcgctgtatttgcatcagaaagcccacaaagatcacctttgtgagaaagga 320
Query: 121 tgtttcagtgttgacgctggggaatctcaggcttgcagtgactgtttctctcatccacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttcagtgttgacgctggggaatctcaggcttgcagtgactgtttctctcatccacct 380
Query: 181 tctcttagcatgactgactccctgactcccctgctttgttctcccggcctaactcaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcttagcatgactgactccctgactcccctgctttgttctcccggcctaactcaggaa 440
Query: 241 agccagctgctgtcttgctgggtcacctttgccttgcccaaatctgagccatctccttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccagctgctgtcttgctgggtcacctttgccttgcccaaatctgagccatctccttca 500
Query: 301 ccctttgctctctggttttctgccaagttccagggttcaagttaaagctgcttctgaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccctttgctctctggttttctgccaagttccagggttcaagttaaagctgcttctgaagt 560
Query: 361 ccagcctcacttagaatccctgacctgagtcaacccctaaacatgagct 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccagcctcacttagaatccctgacctgagtcaacccctaaacatgagct 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
