NAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCACCTGATTACTACTGAATGGCAGAGAAGCACCTGAAAAAA
TGTTCAACATCCTTAATCATCAGGGAAATGCAAACCAAAACAACCCTGAG
ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAATCTCAGGTGACA
GCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGG
TGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCT
CAGAAAATTGGAAATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGG
GCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACT
ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAA
TGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCC
AAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACA
AAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAA
CCTATGATACCCAAGATATAAGATACATTTCCTTAACACATGAAACTCCA
GAAAAATGAAAACTGGAATGGGGAGCCTATGCCCCCCCTTANAAAAGGGA
CAAAAAACCCTTCGGAAGGGAGTAAAGAA

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGCTCTGAGTCTTCTTTTAATTT
TATTAAGATGTGTTTTCAAAAGAGGGTGTTACATTTTATGAACTGCCATT
GCCACATCTATGAAAAAATATGCTTTGAAAAATATTGATTAACCAGTTTT
TCTAATGATCCATTTAGTTCTTTCATTCATGTATAAGACTGAATTTTTCT
TGACTTTTTTAGTATAAATACAGAATGGCAGTTATATAAGTTAGGAATTT
TTTAAAAGTTGCCTCTCAGATTCACTTTTTACACCTTTGCTTGCATAGTT
ATGCAACAAAGAAAGAACCTTAGAATTTCTGTAAGGTCCATTTCTGTTTT
ATATTCTTTACTGTTGATTTCTAGTTTTTCCTTTTGAAGTCCCTTTCTCC
TTTGCCTGATGGTTTTACACATTTTTGTTAGGGAGTATTATCTTCACCTT
TTTCTTAATTCTGCAATTTATAGAAAATTTATTAACCCAATATATAGTTA
TATTTAATAAAACTTTAACATTTGAAAATTTTATTTTCTTATTATAGGAT
ATATAAGTATATTTAAGTTATATGTGCTTTATAGTGGTGTCACTTTACAC
TTAAGAATATGGACAGTTTTTTTCTTAATTAATGCACCCTCCCATTAAGA
ACTAACAGCACATTTCCCTAAAAATATTTCTATTTTCCTTAATGTCCTAT
ATGTAT

Query= MSMg01no409_m17.g1 MSMg01no409_m17.g1 CHROMAT_FILE:
MSMg01no409_m17.g1 PHD_FILE: MSMg01no409_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:17 2005
         (514 letters)



>mm_chr2_108576970_108577883
          Length = 914

 Score =  955 bits (494), Expect = 0.0
 Identities = 509/514 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggctctgagtcttcttttaattttattaagatgtgttttcaaaagagggtgttacattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tggctctgagtcttcttttaattttattaagatgtgttttcaaaagagggtgttacattt 603

                                                                       
Query: 61  tatgaactgccattgccacatctatgaaaaaatatgctttgaaaaatattgattaaccag 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tatgacctgccattgccacatctatgaaaaaatatgctttgaaaaatattgattaaccag 543

                                                                       
Query: 121 tttttctaatgatccatttagttctttcattcatgtataagactgaatttttcttgactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tttttctaatgatccatttagttctttcattcatgtataagactgaatttttcttgactt 483

                                                                       
Query: 181 ttttagtataaatacagaatggcagttatataagttaggaattttttaaaagttgcctct 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 482 ttttagtataaatacagaatggcagttatataagttagggattttttaaaagttgcctct 423

                                                                       
Query: 241 cagattcactttttacacctttgcttgcatagttatgcaacaaagaaagaaccttagaat 300
           ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 422 cagattcacttttgacacctttgctcgcatagttatgcaacaaagaaagaaccttagaat 363

                                                                       
Query: 301 ttctgtaaggtccatttctgttttatattctttactgttgatttctagtttttccttttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttctgtaaggtccatttctgttttatattctttactgttgatttctagtttttccttttg 303

                                                                       
Query: 361 aagtccctttctcctttgcctgatggttttacacatttttgttagggagtattatcttca 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 302 aagtccctttctcctttgcctgacggttttacacatttttgttagggagtattatcttca 243

                                                                       
Query: 421 cctttttcttaattctgcaatttatagaaaatttattaacccaatatatagttatattta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cctttttcttaattctgcaatttatagaaaatttattaacccaatatatagttatattta 183

                                             
Query: 481 ataaaactttaacatttgaaaattttattttctt 514
           ||||||||||||||||||||||||||||||||||
Sbjct: 182 ataaaactttaacatttgaaaattttattttctt 149


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)