Query= MSMg01no409_o05.b1 MSMg01no409_o05.b1 CHROMAT_FILE:
MSMg01no409_o05.b1 PHD_FILE: MSMg01no409_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:25 2005
(529 letters)
>mm_chr2_20356233_20357161
Length = 929
Score = 986 bits (510), Expect = 0.0
Identities = 522/526 (99%)
Strand = Plus / Minus
Query: 4 ggaattctatttaaaaatgtccaagcttatatgatgttacataaatattatccccttcaa 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 923 ggaattctatttaaaaatgtcaaagcttatatgatgttacataaatattatccccttcaa 864
Query: 64 aggaattatcttattgccatttaattagtctgctttattttcctggtttggtgtttctga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aggaattatcttattgccatttaattagtctgctttattttcctggtttggtgtttctga 804
Query: 124 gacagcatcttgctatgttgtccaggatgaccacaagctcctgctcctctcgcctctgcc 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gacagcatcttgctatgtcgtccaggatgaccacaagctcctgctcctctcgcctctgcc 744
Query: 184 tcctgagtgttgggtgttcaccgccgcagtcaccttgaggctattttgtttctgatttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcctgagtgttgggtgttcaccgccgcagtcaccttgaggctattttgtttctgatttct 684
Query: 244 ccatcattcaaggcatatttagagattatggagcaatggattatcttttcaacctttctc 303
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 683 ccatcattcaaggcatatttagagattatggagcaatggaaaatcttttcaacctttctc 624
Query: 304 atgctttgacctttggggtaggcatagtattttcatgggaagtaaaaaagaacaagcttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgctttgacctttggggtaggcatagtattttcatgggaagtaaaaaagaacaagcttt 564
Query: 364 gtgaataatatgagcagttcagctacattctgagctcgtttcaaggaccgcacagttcag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtgaataatatgagcagttcagctacattctgagctcgtttcaaggaccgcacagttcag 504
Query: 424 ttccttgatgctatgagatagacctagttaaaccttcagctactgtttgtgggaggtcta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttccttgatgctatgagatagacctagttaaaccttcagctactgtttgtgggaggtcta 444
Query: 484 ggcccagacaatgctattgttagtgctggaagcactttataaacaa 529
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggcccagacaatgctattgttagtgctggaagcactttataaacaa 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_o05.g1 MSMg01no409_o05.g1 CHROMAT_FILE:
MSMg01no409_o05.g1 PHD_FILE: MSMg01no409_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:25 2005
(447 letters)
>mm_chr2_20329549_20330394
Length = 846
Score = 818 bits (423), Expect = 0.0
Identities = 441/447 (98%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 1 atctcttggctcatttcctctagtagcataaaccatattttaagttagaaagcaggggaa 60
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 atctcttggctcattt-ctctagtagtataaaccatattttaagttagaaagcaggggaa 259
Query: 61 ctcctgaagactatgttgttgacctatcaagcagatccaatggttgacatttctggaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctcctgaagactatgttgttgacctatcaagcagatccaatggttgacatttctggaaga 319
Query: 121 cttaggcggatttgctgaagaagaggtaaatctggagagtgaagcctggacatttgtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttaggcggatttgctgaagaagaggtaaatctggagagtgaagcctggacatttgtgaa 379
Query: 181 cccctcctcaaaatgctgtgcaatcacttggcagatgctggaggaaatcactctagcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccctcctcaaaatgctgtgcaatcacttggcagatgctggaggaaatcactctagcctg 439
Query: 241 taaccagcagcagggatctgagaccttaaaagatttcagctgtcctcacctttctgtggt 300
|||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 440 taaccagcagcagggagctgagaccttaaaagatttcagccgttctcacctttctgtggt 499
Query: 301 tacagtgtaagttgaagaggtagcattagggaggaagtttaagactccaaggctagagct 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacagtataagttgaagaggtagcattagggaggaagtttaagactccaaggctagagct 559
Query: 361 gtgactgtcatctagctggatgtggctaagtggtgtgtagatcacggtgggatctagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgactgtcatctagctggatgtggctaagtggtgtgtagatcacggtgggatctagaag 619
Query: 421 tgtctgaggcatcctgtttcctcccag 447
|||||||||||||||||||||||||||
Sbjct: 620 tgtctgaggcatcctgtttcctcccag 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space: 365332
Effective search space used: 365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
