Query= MSMg01no410_f24.b1 MSMg01no410_f24.b1 CHROMAT_FILE:
MSMg01no410_f24.b1 PHD_FILE: MSMg01no410_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:05 2005
(423 letters)
>mm_chr2_20657426_20658247
Length = 822
Score = 679 bits (351), Expect = 0.0
Identities = 398/425 (93%), Gaps = 22/425 (5%)
Strand = Plus / Minus
Query: 10 tctgtgacgttcc--aggcagtttgcattgcaggctcacccaaaaaactgtttaccatca 67
||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tctgtgaag-tccaaaggcagtttgcattgcaggctcacccaaaaaactgtttaccatca 430
Query: 68 ccgattgcttgtggttattaagggagggggaaagtggtctccccaacaccactgccttcc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccgattgcttgtggttattaagggagggggaaagtggtctccccaacaccactgccttcc 370
Query: 128 caagacgtcccattagaaactagattttgatgatgtggctgtaacagatgccgtctaaga 187
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 369 caagacgtcccattagaaactagattttgatgatgtggctgtaacagatgccatctaaga 310
Query: 188 ggtttggaaagaggaggagggatttgaaaacccttgttttgatttttttaatctaatcag 247
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 309 ggcttggaaagaggaggagggatttgaaaacccttgttttga-ttttttaatctaatcag 251
Query: 248 cacagatttgttatctttcagcaggct---------atttttttttatgcttggctccca 298
||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 250 cacagatttgttatctttcagcaggctaaggaagcaa---------atgcttggctccca 200
Query: 299 ggcatctggcatacatttggtaggttttgttgggtcacagcagggctttccaggaagggg 358
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 199 ggcatctggcatacatttggtaggttttgttgggtcacaggagggctttccaggaagggg 140
Query: 359 aatttagaggctggccttcgttgtctgtgagagtcacatccagctctactatacctctaa 418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 139 aatttagaggctggccttcgttgtctgtgagagccacatccagctctactatacctctaa 80
Query: 419 tgcta 423
|||||
Sbjct: 79 tgcta 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 822
Length adjustment: 9
Effective length of query: 414
Effective length of database: 813
Effective search space: 336582
Effective search space used: 336582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_f24.g1 MSMg01no410_f24.g1 CHROMAT_FILE:
MSMg01no410_f24.g1 PHD_FILE: MSMg01no410_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:06 2005
(415 letters)
>mm_chr2_20448407_20449221
Length = 815
Score = 779 bits (403), Expect = 0.0
Identities = 412/415 (99%)
Strand = Plus / Plus
Query: 1 tccccaggtgactcaaatggcccaaatgtcatttctccttcaggtgtggggctggcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccccaggtgactcaaatggcccaaatgtcatttctccttcaggtgtggggctggcagct 260
Query: 61 gcccagagcagaggaaagacctaatcaactgtgaagagtttgtggacaggactgggttac 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccagagcagaggaaaggcctaatcaactgtgaagagtttgtggacaggactgggttac 320
Query: 121 tgaggtgctggtgctgggctggggtggaggcagatgggactaatggagtggtggatgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggtgctggtgctgggctggggtggaggcagatgggactaatggagtggtggatgagc 380
Query: 181 gcaagcaataaaggcgagcagacaaagatgggctctgtgtgctggctggcctgtgtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaagcaataaaggcgagcagacaaagatgggctctgtgtgctggctggcctgtgtcagt 440
Query: 241 ctcccttgttaactgctggtacctttccatccctttaatgtatgtcacattcagttttgt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ctcccttgttaactgctggtacctttccatccctttactgtatgtcacattcagttttgt 500
Query: 301 tagaccactggaaacattattttaaaatccacaagaacataaacaaagtagaaaaacagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaccactggaaacattattttaaaatccacaagaacataaacaaagtagaaaaacagc 560
Query: 361 ataaaattgatgcaacctttcccatgaaaagcatgaaggaagggttgagtttaaa 415
||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaaattgatgcgacctttcccatgaaaagcatgaaggaagggttgagtttaaa 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
