Query= MSMg01no410_i03.b1 MSMg01no410_i03.b1 CHROMAT_FILE:
MSMg01no410_i03.b1 PHD_FILE: MSMg01no410_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:16 2005
(569 letters)
>mm_chr2_119042028_119042996
Length = 969
Score = 909 bits (470), Expect = 0.0
Identities = 485/490 (98%)
Strand = Plus / Minus
Query: 80 ggttctcgatatagaaggtgttgggcacctgcaggtataggtctgtggtagagcagcaca 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ggttctcgatatagaaggtgttgggcacctgcaggtataggtctgtggtagagcagcaca 910
Query: 140 cactaagtatgtatgaggatgtggtttcagtcccaagtagtgccagtaacaaatacacaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 cactaagtatgtatgaggatgtggtttcagtcccaagtagtgccagtaacaaatacacaa 850
Query: 200 gtgaaaggttctggaatgaaggatgtaacatccttctgtagcatgtgcaaggccctgggc 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gtgaaaggttctggaatgaaggatgtaacatccttctgtagcatgtgcaaggccctgggc 790
Query: 260 tcaatccccaggatatatttaacatctggggccaatggctcaacacattttattagatcc 319
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 tcaatccccaggacagaaaaaacatctggggccaatggctcaacacattttattagatcc 730
Query: 320 cagtatagccaggattgggcctgggaagcagatttcaggtatcacttttagcttcagtat 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 cagtatagccaggattgggcctgggaagcagatttcaggtatcacttttagcttcagtat 670
Query: 380 ggtgtcttctccatctgtctctgtttgaggccagcctcttaggggagggccatgactcct 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggtgtcttctccatctgtctctgtttgaggccagcctcttaggggagggccatgactcct 610
Query: 440 cctctcacctggcccctctcagacttattatgtttcttccttccagggactgggaagctc 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 cctctcacctggcccctctcagacttattatgtttcttccttccagggactgggaagctc 550
Query: 500 acaaaagggtgtgtttaccatcagtagagcagggtcttctgtccccctggatgccctgag 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acaaaagggtgtgtttaccatcagtagagcagggtcttctgtccccctggatgccctgag 490
Query: 560 acttggccca 569
||||||||||
Sbjct: 489 acttggccca 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_i03.g1 MSMg01no410_i03.g1 CHROMAT_FILE:
MSMg01no410_i03.g1 PHD_FILE: MSMg01no410_i03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:16 2005
(336 letters)
>mm_chr2_118854516_118855251
Length = 736
Score = 613 bits (317), Expect = e-180
Identities = 331/341 (97%), Gaps = 10/341 (2%)
Strand = Plus / Plus
Query: 1 caagtccagccagcgcgagggcccaaagtagatagtagtagaaggtcagatatgtcacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagtccagccagcgcgagggcccaaagtagatagtagtagaaggtcagatatgtcacga 260
Query: 61 agtccttagaatctccgtggaagtactctacacacccaaaccccaagtctgcactcactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtccttagaatctccgtggaagtactctacacacccaaaccccaagtctgcactcactc 320
Query: 121 gggggtggggtggggtgaggcatgtccctgaccccgggaaccttcagaacggtagaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggggtggggtggggtgaggcatgtccctgaccccgggaaccttcagaacggtagaggaa 380
Query: 181 aacgtgtgtccagatcccaggcctcagtcaccccggcctaaacaaatcactggtcttgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacgtgtgtccagatcccaggcctcagtcaccccggcctaaacaaatcactggtcttgac 440
Query: 241 gattttttcc-----ctgataccctcagttgtgtttcggggtcaggccatagtaggagat 295
||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gat-----ccggcccctgataccctcagttgtgtttcggggtcaggccatagtaggagat 495
Query: 296 gctaaacacgggacaccgcggcccctcacctaccgcaatta 336
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctaaacacgggacaccgcggcccctcacctaccgcaatta 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
