NGGGTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
GCGCGGAATTCATATCCATTGCGATCAGAGCCCTGGGGAAGGACTTGTTA
TTTTTTTTTCTGTTAAATGGATATAGTAGTATAGTATTAAGTTATACCCT
ATAAATTTAAGTTTATAAGCACCTATTTAGTATAGCTTTCAACCTTGATC
GGAGAAACTTATTTTTTGAGCAAATTGTAATGAATGCAAAGACTCACAAC
TGATTAAAGCACAAAGAATAAGAGACTATGGGTGTTTTGCCCTAAATGGG
AGTTCTGTATTTCACTCCTTCCTAATGTTCAGGAATCATATCATAATAGG
CAGTTGAAAGATCCTAAGAGCCAGAGATGATGGAAGACAACTGGAAAAAA
CAAAACAAAACAGTGTTTTCTGGACATGACAATGACTATAACTTCATGAA
CAAGATTATACAAGATCAGACTAGAAAAATATCAGCATATAGGCAAGGGG
CTCATGCGGTTCCAGATTTAGTTGAGCTGTGGAAAAGGGATGGGCTTGTG
AATGCTGGGTGGTCAATTGTCTTTGGATGTGACCATTGACAGGCTGTCTA
CATCTCAGTGGGTAGTCCTACTCCCATGGACATACTGCCTTACCCAGTAG
ACTCTGTGTTCTTAGATAAGACCACATACTCTCGGCAGGGAGAAGTATGG
CATATATGCGAGGTTGTAGATCCTGCGTGTCCCGTATCTCTTTN

NNTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGACCTCCCAATGGAAGTA
CAGATGTTGAAAATTCAAGTGGCTGTTATAATTAAGGATATGAAAGCAAT
GGTGGGTAAAAAGGCTGCTCTGTGTTGATTTGTGGATTATATTTTGAGTG
TATTGAATGTTTATAAGGAGAAAAATGAAAAGATAAGGCACATTAAGGCT
CATTTGAAGTTGTGGCATGAGAACCAGACAGTATCATGGGAATCAGACAG
TCATGTCAGTCTTAAAATGACTTTTCTCTGGTAGGTACAAGACTTAAATC
ACAGAATATATCCATTTGTTTCTGCTATGATAATAAAACTGATTTGGTGG
CTTATAAAAAAATAGTTACTTCTTCTGGTTATGGAGACCAGGAAGCCCTG
CCTCATTGTACTTTAACCTGTCAAGAGTCTTACCATTGTGTCATAATATG
ATGAAGGGCATAATGTCATGAGACAGCCCACACACAGTGAAGAAAGGACA
AGAGAAAAGACTGTGCAAAGCCTCAGCCTCCTGAGACCATCACACAGTCA
ATGCTGTCCTGCCTCAGTTTAAGAGATCTTCCAAGCACGCCCCGAACCCA
AACTAATTGAATTGTGAGAGTTCCTTGATTCTTACCATTATGTAGTAATT
GGCCCTAAGGCAACTCCCTCTTTTTTGTTAAAGTCTATTAACCTCCCTGG
T

Query= MSMg01no410_k01.g1 MSMg01no410_k01.g1 CHROMAT_FILE:
MSMg01no410_k01.g1 PHD_FILE: MSMg01no410_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:25 2005
         (505 letters)



>mm_chr2_133662338_133663242
          Length = 905

 Score =  907 bits (469), Expect = 0.0
 Identities = 496/505 (98%), Gaps = 1/505 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtgacctcccaatggaagtacagatgttgaaaattcaagtggctgttataattaaggat 60
           |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgacctcctaatggaagtacaggtgttgaaaattcaagtggctgttataattaaggat 260

                                                                       
Query: 61  atgaaagcaatggtgggtaaaaaggctgctctgtgttgatttgtggattatattttgagt 120
           |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 atgaaagcaatgttgggtaaaaaggctgctttgtgttgatttgtggattatattttgagt 320

                                                                       
Query: 121 gtattgaatgtttataaggagaaaaatgaaaagataaggcacattaaggctcatttgaag 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gtattgaatgtttataaggagaaaaatgaaaagataaggcccattaaggctcatttgaag 380

                                                                       
Query: 181 ttgtggcatgagaaccagacagtatcatgggaatcagacagtcatgtcagtcttaaaatg 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtggtatgagaaccagacagtatcatgggaatcagacagtcatgtcagtcttaaaatg 440

                                                                       
Query: 241 acttttctctggtaggtacaagacttaaatcacagaatatatccatttgtttctgctatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttttctctggtaggtacaagacttaaatcacagaatatatccatttgtttctgctatg 500

                                                                       
Query: 301 ataataaaactgatttggtggcttataaaaaaatagttacttcttctggttatggagacc 360
           |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 501 ataataaaactgatttggtggcatataaaaaa-tagttacttcttctggttatggagacc 559

                                                                       
Query: 361 aggaagccctgcctcattgtactttaacctgtcaagagtcttaccattgtgtcataatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aggaagccctgcctcattgtactttaacctgtcaagagtcttaccattgtgtcataatat 619

                                                                       
Query: 421 gatgaagggcataatgtcatgagacagcccacacacagtgaagaaaggacaagagaaaag 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 gatgaagggcataatgtcatgagacagcccacacacagtgaagaaaggacaagagagaag 679

                                    
Query: 481 actgtgcaaagcctcagcctcctga 505
           |||||||||||||||||||||||||
Sbjct: 680 actgtgcaaagcctcagcctcctga 704


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)