Query= MSMg01no411_b20.b1 MSMg01no411_b20.b1 CHROMAT_FILE:
MSMg01no411_b20.b1 PHD_FILE: MSMg01no411_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:03 2005
(515 letters)
>mm_chr2_168354925_168355839
Length = 915
Score = 868 bits (449), Expect = 0.0
Identities = 452/453 (99%)
Strand = Plus / Minus
Query: 63 catttcctctgaggtgtaattaagaaactgtagccttcacagaggtgccatttagctgaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 catttcctctgaggtgtaattaagaaactgtagccttcacagaggtgccatttagctgaa 856
Query: 123 tggctaaatacatctcatgtatatgtgtatatacacataaatatacacatttacaggtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 tggctaaatacatctcatgtatatgtgtatatacacataaatatacacatttacaggtat 796
Query: 183 acatatgcacacataaaaatgtttatacatgtatgtatatacacacacacacatatgcac 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acatatgcacacataaaaatatttatacatgtatgtatatacacacacacacatatgcac 736
Query: 243 acacaagcacacacatacactctcttcatactccctcatcaccaccattcttgccaagac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 acacaagcacacacatacactctcttcatactccctcatcaccaccattcttgccaagac 676
Query: 303 acagagcacctggccttgtcaggtccctgtcaccccctcaatgactgcctcttcccaggc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acagagcacctggccttgtcaggtccctgtcaccccctcaatgactgcctcttcccaggc 616
Query: 363 tccagagagaggcagtcacagattggctacctgtcgccagcgatggatgtccccagctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tccagagagaggcagtcacagattggctacctgtcgccagcgatggatgtccccagctct 556
Query: 423 gtgactttgtagagtggaatacatgcacaggctgtgcaccttgggggcctcctgttgctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtgactttgtagagtggaatacatgcacaggctgtgcaccttgggggcctcctgttgctg 496
Query: 483 gagtcaacagtttgcccttatgggtggctgagc 515
|||||||||||||||||||||||||||||||||
Sbjct: 495 gagtcaacagtttgcccttatgggtggctgagc 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_b20.g1 MSMg01no411_b20.g1 CHROMAT_FILE:
MSMg01no411_b20.g1 PHD_FILE: MSMg01no411_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:03 2005
(407 letters)
>mm_chr2_168222190_168222996
Length = 807
Score = 696 bits (360), Expect = 0.0
Identities = 396/408 (97%), Gaps = 5/408 (1%)
Strand = Plus / Plus
Query: 1 ttgttgggagaaaggaagttgaacctgtaatcttaattaagactacatggcattctgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttgttgggagaaaggaagttgaacctgtaatcttaattaagactacatggcattctgcag 257
Query: 61 atag-gg-g-gggggtgaactccctggacaaggtcagaaggagaggccctgccaacgaag 117
|||| || | |||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 258 atagaggtgtgggggtgaactctctggataaggtcagaaggagaggccctgccaacgaag 317
Query: 118 ggagttctccattatgtgctga-tctctggaagcctatctgatcaatggtagatttcaac 176
|||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct: 318 ggagttctccattatgtgctgagt-tctggaagcctatctgatcaatggtagacttcaac 376
Query: 177 cttagttagcagctttcccacaatacacaaatgtgcacactcacaggaaggactctgtaa 236
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cttagttagcagttttcccacaatacacaaatgtgcacactcacaggaaggactctgtaa 436
Query: 237 gcacagacccatgggatatagactgggcatggccacccctgagacctgctggcccgtgtg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gcacagacccatgggatatagactgggcatggccacccctgagacctgctggcccgtgtg 496
Query: 297 cctggtccacagtcttcttgttctctctacggggagaagagcatcaggtaaagcttagca 356
|| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cccagtccacagtcttcctgttctctctacggggagaagagcatcaggtaaagcttagca 556
Query: 357 tttaggacctcttggggctctccttctcctccccctctccctccccct 404
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tttaggacctcttggggctctccttctcctccccctctccctccccct 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
