Query= MSMg01no411_k18.b1 MSMg01no411_k18.b1 CHROMAT_FILE:
MSMg01no411_k18.b1 PHD_FILE: MSMg01no411_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:48 2005
(564 letters)
>mm_chr2_76231747_76232711
Length = 965
Score = 503 bits (260), Expect = e-146
Identities = 313/332 (94%), Gaps = 5/332 (1%)
Strand = Plus / Minus
Query: 5 gaattccccgttta-cattatccttagtttgtccacaccaattctcttcttgagtttgta 63
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaattcctcgtttataattatccttagtttgtccacaccaattctcttcttgagtttgta 272
Query: 64 aaggcttgtgtgatctaccactggaacctatttgatggtctccatttcagcttgccttac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaggcttgtgtgatctaccactggaacctatttgatggtctccatttcagcttgccttac 212
Query: 124 aagcaaaggacaatccttttcaaatatgttatatagtgaacagtct---atatagaggtt 180
|||||||||||||| ||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 211 aagcaaaggacaattcttttcaaatatgttatatagtgaacagtctcaaagacagaggtt 152
Query: 181 ccctctggagcaagagtcagatttgttatctggcattttctcctttcagggaaaataagg 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 151 ccctctggagcaagagtcagatttgttatctgacattttctcctttcagggaaaataagg 92
Query: 241 acaaatccagttacttttacaaagatttctagcccctaagcccatttgttttccctcagt 300
||||| ||||| |||||| |||||||| |||||||||||||||||||||| ||||||||
Sbjct: 91 acaaacccagtgccttttataaagatttttagcccctaagcccatttgtttcccctcagt 32
Query: 301 tctgacacaaaattgcagtgtgcatggtctgt 332
| |||||| |||| ||||||||||||||||||
Sbjct: 31 tatgacac-aaatcgcagtgtgcatggtctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 965
Length adjustment: 10
Effective length of query: 554
Effective length of database: 955
Effective search space: 529070
Effective search space used: 529070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_k18.g1 MSMg01no411_k18.g1 CHROMAT_FILE:
MSMg01no411_k18.g1 PHD_FILE: MSMg01no411_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:48 2005
(494 letters)
>mm_chr2_76056506_76057398
Length = 893
Score = 886 bits (458), Expect = 0.0
Identities = 485/494 (98%), Gaps = 1/494 (0%)
Strand = Plus / Plus
Query: 1 aataaacatgctaaacatgcttgcaacttactgaaaaaaaaacatcacttgtagtaggaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 aataaacatgctaaacatgcttgcaacttactgaaaaaaaaatatcacttgtagtaggaa 260
Query: 61 ttgacatagacaaagcccttctatcgattgggcaggcaggattctgggagtcaggcatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgacatagacaaagcccttctatcgattgggcaggcaggattctgggagtcaggcatga 320
Query: 121 tgttcagatttctctaagaatcatctccctctgatcctcacagatatacattctaccagt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttcagatttctctaagaattatctccctctgatcctcacagatatacattctaccagt 380
Query: 181 agctgcacttttgtaagatgaggaatgaggtttgtaagggtaccaaatgctcttgggaga 240
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 381 agctgcacttttgtaagatgaggaatgagatttgtaagggtaccaaacgctcttgggaga 440
Query: 241 taattcttcatggctttcccctcctccccacaccactccctctctcgtcagcacatttta 300
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 taattcttcatggcttttccctcctccccacaccactctctctctcgtcagcacatttta 500
Query: 301 cagaggcgctgcactgtcaaggatgtttgcacaatgaatgcccttcgaaggcagacacag 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaggcgc-gcactgtcaaggatgtttgcacaatgaatgcccttcgaaggcagacacag 559
Query: 361 cacctccttgctagtaaaaagcagaattatttgctatgcaatataataaagattatttct 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catctccttgctagtaaaaagcagaattatttgctatgcaatataataaagattatttct 619
Query: 421 cccactggacaggtagcttcagttgccttgagtttgaggttgctcctgctccacgtgaag 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cccactggacgggtagcttcagttgccttgagtttgaggttgctcctgctccacgtgaag 679
Query: 481 ttataagtctaaga 494
||||||||||||||
Sbjct: 680 ttataagtctaaga 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
