Query= MSMg01no411_l08.b1 MSMg01no411_l08.b1 CHROMAT_FILE:
MSMg01no411_l08.b1 PHD_FILE: MSMg01no411_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:51 2005
(270 letters)
>mm_chr2_91756074_91756743
Length = 670
Score = 503 bits (260), Expect = e-147
Identities = 266/268 (99%), Gaps = 2/268 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctt-gttttcgaagtactcatggatgacaggtaactcaaggttacctgttact 62
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ggaattccttggtttt-gaagtactcatggatgacaggtaactcaaggttacctgttact 412
Query: 63 agctggttttacaaggttttctttgtcccttgccctaagtcttttctctgtttgcttatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agctggttttacaaggttttctttgtcccttgccctaagtcttttctctgtttgcttatt 352
Query: 123 tgtcttagacttctaggtcagttaccttcattacttcatgacttaactctgtctaaggcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgtcttagacttctaggtcagttaccttcattacttcatgacttaactctgtctaaggcc 292
Query: 183 ccatctctcttgcataggacctggcagataatcgctcacatttcttcctctgggtcttga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ccatctctcttgcataggacctggcagataatcgctcacatttcttcctctgggtcttga 232
Query: 243 tccattttcctcagctctaagcagtgag 270
||||||||||||||||||||||||||||
Sbjct: 231 tccattttcctcagctctaagcagtgag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no411_l08.g1 MSMg01no411_l08.g1 CHROMAT_FILE:
MSMg01no411_l08.g1 PHD_FILE: MSMg01no411_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:51 2005
(242 letters)
>mm_chr2_91583714_91584355
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 aaggccaacctgggctatatgagactgtctggaaaaaaagaatagcacttgggaggcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggccaacctgggctatatgagactgtctggaaaaaaagaatagcacttgggaggcaga 260
Query: 61 ggcaggtggatcactgagtttgaggccaggacagcagggctacaccattgccagacgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcaggtggatcactgagtttgaggccaggacagcagggctacaccattgccagacgtac 320
Query: 121 agaatgacaacgtggttttggagaatgagcttccttcttacgtgagacttcagccttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatgacaacgtggttttggagaatgagcttccttcttacgtgagacttcagccttgtc 380
Query: 181 cgtctgattgaggatggcaagtgcagcatttcatatggcactttgggaatcaagaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgtctgattgaggatggcaagtgcagcatttcatatggcactttgggaatcaagaaagga 440
Query: 241 aa 242
||
Sbjct: 441 aa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
