Query= MSMg01no411_n19.b1 MSMg01no411_n19.b1 CHROMAT_FILE:
MSMg01no411_n19.b1 PHD_FILE: MSMg01no411_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:03 2005
(530 letters)
>mm_chr2_64516556_64517485
Length = 930
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%)
Strand = Plus / Plus
Query: 5 gaattccttatgtgccaatatttttatttgcattaaataaaataaataagactacaaagg 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttatgtggtaatatttttatttgcattaaataaaataaataagactacaaagg 264
Query: 65 aatctaatttataatgacattatggtttcaatctgaatcgctcacctcaaggtccttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatctaatttataatgacattatggtttcaatctgaatcgctcacctcaaggtccttttt 324
Query: 125 ccgagttctcatgccacacctgctgatattattgtgaagattttaaatgttaaggatatg 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 ccgagttctcatgccacacctgctgatattattgtgaagattttgaatgttaaggatatg 384
Query: 185 gggctgagctgggaaatagatatctcctagtggccatgattgctctgctttctggtctat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggctgagctgggaaatagatatctcctagtggccatgattgctctgctttctggtctat 444
Query: 245 catcatttgagaagtatctactacaggctcctaccaaggtggacttggcctagcttcttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catcatttgagaagtatctactacaggctcctaccaaggtggacttggcctagcttcttc 504
Query: 305 agcttaatgaactgctacctctctgaaatcatgagtcaaaggaatgttttatgtcttgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agcttaatgaactgctacctctctgaaatcatgagtcaaaggaatgttttatgtcttgtt 564
Query: 365 atgggcaagaattttgtcacatcaatataaaaaacccaaatagctaatataagccagaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgggcaagaattttgtcacatcaatataaaaaacccaaatagctaatataagccagaaa 624
Query: 425 atacaaacataatgttgtgatatattttcctattaacatattaaatgaaaagtgatttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atacaaacataatgttgtgatatattttcctattaacatattaaatgaaaagtgatttgg 684
Query: 485 tagcaactaccgtatctccatgaaaattagcaagaaaaaactaatt 530
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagcaactaccgtatctccatgaaaattagcaagaaaaaactaatt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_n19.g1 MSMg01no411_n19.g1 CHROMAT_FILE:
MSMg01no411_n19.g1 PHD_FILE: MSMg01no411_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:03 2005
(508 letters)
>mm_chr2_64694549_64695455
Length = 907
Score = 951 bits (492), Expect = 0.0
Identities = 504/508 (99%), Gaps = 1/508 (0%)
Strand = Plus / Minus
Query: 1 tttgattactcaccccctctcccataacagaaagtcaagatttaggttccttaaattgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tttgattactcaccccctctcccataacagaaagtcaagatttaggttccttaaattgaa 648
Query: 61 gaccctctaatttgcactgcttccaatctactcagccttccaggctggttttgatcctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gaccctctaatttgcactgcttccaatctactcagccttccaggctggttttgatcctag 588
Query: 121 ctgattatttctactttggctgtggactcatacaaacttacagttttaatttatagatat 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctgattatttctaccttggctgtggactcatacaaacttacagttttaatttatagatat 528
Query: 181 tcattttaaattctattgctttgaaacaaaggccatcacaatttttaaattgaaaaaggt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527 tcattttaaattctattgctttgaaacaaaggccatcaccatttttaaattgaaaaaggt 468
Query: 241 atatgggtgtgacagcagaaatcaccttctcacctagatattactcattttttttttact 300
||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 467 atatgggtgggacagcagaaatcaccttctcacctagatattactca-tttttttttact 409
Query: 301 tttactgattgtaaatatttgctaaaataaaaaattagaaggaaaaagaaaataaccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tttactgattgtaaatatttgctaaaataaaaaattagaaggaaaaagaaaataaccttt 349
Query: 361 tccctcccaatacactttccccccttttctgaaagctgaaagcattttgttttctagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tccctcccaatacactttccccccttttctgaaagctgaaagcattttgttttctagagc 289
Query: 421 tttataaagttcaacacataaaaggttaggagcctgccttttttctgtcgtatacatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttataaagttcaacacataaaaggttaggagcctgccttttttctgtcgtatacatctt 229
Query: 481 tgaaaaattggtttatgaagagtcatac 508
||||||||||||||||||||||||||||
Sbjct: 228 tgaaaaattggtttatgaagagtcatac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
