Query= MSMg01no411_o21.b1 MSMg01no411_o21.b1 CHROMAT_FILE:
MSMg01no411_o21.b1 PHD_FILE: MSMg01no411_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:08 2005
(656 letters)
>mm_chr2_85759819_85760874
Length = 1056
Score = 1237 bits (640), Expect = 0.0
Identities = 649/652 (99%)
Strand = Plus / Plus
Query: 5 gaattccatgtattgttcaattgtttttgaaatagaagttctttctgatgtttctgtgcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgtattgttaaattgtttttgaaatagaagttctttctgatgtttctgtgcc 264
Query: 65 tatttcctgtagtaaatgcttgtcagtttctagtccctctgtggaattacctcagtagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatttcctgtagtaaatgcttgtcagtttctagtccctctgtggaattacctcagtagct 324
Query: 125 acttgtttatatatccacacattaattaagaagcaattaatataacatagctttgctaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttgtttatatatccacacattaattaagaagcaattaatataacatagctttgctaga 384
Query: 185 tttcaaacttcacagaaagaaattggccatgttctttttctgtagagaatttcattaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 tttcaaacttcacagaaagaaattggccatgttctttttctgtagagaattacattaaca 444
Query: 245 ttgttagacttatacacactaattcatttaggtgctcttttgctcatatagtctctatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgttagacttatacacactaattcatttaggtgctcttttgctcatatagtctctatgt 504
Query: 305 ctctgtccatataccatctattcacagctatgtatctgttctcttctgagagaacaattg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctctgtccatataccatctattcacagctatgtatctgttctcttctgagagaacaattg 564
Query: 365 tatattctgctttcctgataatatgaaattccgcagatatacttcatacaattctaaata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatattctgctttcctgataatatgaaattccgcagatatacttcatacaattctaaata 624
Query: 425 tgcatctctgaaaaagtgctgctgctttgggtttatagtgtatgaacatctccacatttt 484
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcatctctgaaaaagtgctgcttctttgggtttatagtgtatgaacatctccacatttt 684
Query: 485 tttgcatattgacaatactttgccagctagtactccagccaatagcacttgttttcttca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttgcatattgacaatactttgccagctagtactccagccaatagcacttgttttcttca 744
Query: 545 ctttgcaatcttgccgatgcaagagattgtaagacttggtattgaatatttaatatttgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctttgcaatcttgccgatgcaagagattgtaagacttggtattgaatatttaatatttgc 804
Query: 605 tctgctatatctaggtgatgccaatacagagggtcagaaaaaataagtcatt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tctgctatatctaggtgatgccaatacagagggtcagaaaaaataagtcatt 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_o21.g1 MSMg01no411_o21.g1 CHROMAT_FILE:
MSMg01no411_o21.g1 PHD_FILE: MSMg01no411_o21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:08 2005
(558 letters)
>mm_chr2_85957546_85958503
Length = 958
Score = 1033 bits (534), Expect = 0.0
Identities = 551/558 (98%), Gaps = 3/558 (0%)
Strand = Plus / Minus
Query: 1 agtaaagacatgaaacatagaagatgatttgatgttgtttactaccacagttcactaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agtaaagacatgaaacatagaagatgatttgatgttgtttactaccacagttcactaaag 516
Query: 61 gtgaagctttctaatgggaaattggtgtgcccagaaggatgactggtatctttgaaccta 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 515 gtgaagctttctaatgggaaattggtgtgcccagaaggatgactggtatcttggaaccta 456
Query: 121 aactccatccgtcttaccttcatagcaataagcttggcttccagtgagctcattctgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aactccatccgtcttaccttcatagcaataagcttggcttccagtgagctcattctgaag 396
Query: 181 ttgtcttggtgatttatttccttggtccctcaagatctcagcctctcctgagataacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttgtcttggtgatttatttccttggtccctcaagatctcagcctctcctgagataacctg 336
Query: 241 aacttattctattcccttctgtgctttcctcagtggaagacaagctgtaaaaattatatt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aacttattcaattcccttctgtgctttcctcagtggaagacaagctgtaaaaattatatt 276
Query: 301 gtggattttcaagaaatctcttcattagaatcctgaaggaacaatttccaacttaacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gtggattttcaagaaatctcttcattagaatcctgaaggaacaatttccaacttaacaat 216
Query: 361 taaatagttcctttagacctaaggagctgaaggggtttgcagccccataggaggaacaac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 215 taaatagttcctttagacctaaggagctgaaggggtttgcagccccataggagg---aac 159
Query: 421 aatatgaaccaaccagaccctctagagttcccaggaacaaaatcaccaaccaaagagtac 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 158 aatatgaaccaaccagaccctctagagctcccaggaacaaaatcaccaaccaaagagtac 99
Query: 481 acatagtggactcatggctccccctgcatatgtagcagaggatggccttgtctggcatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 acatagtggactcatggctccccctgcatatgtagcagaggatggccttgtctggtatca 39
Query: 541 atgggaggagaggccctt 558
||||||||||||||||||
Sbjct: 38 atgggaggagaggccctt 21
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
